G588755


Basic Information

Item Value
gene id G588755
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 24904331 ~ 24905581 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU671438
gggggccgaatactttcacaaggcattGTATTTGACCCCTTAGTGTATGCAATATAAACTCCATAACCACAGTTTGAATGCCTTTAGGCCCAATATAAGGTGACACAAAGCTAGTATAGGATTCGTCCAGTGACCAAGAGCTGAGGACTCGTCTGAGGATGACATCACTTACACCGGCTGTCCCTGCCATCCAACTCGGATGCCAGCAGAATAGATTTATGCTTTTACCAAGAGCAGGTGAAGTGGCCCACAGGCCATTTGCGGAGTGGATTTGTCATATCCATAATTGGATTTTCCAGCATTTTTTAAGAAAAATAATCATAGTACTTAATGCATGGCCAGTTATTGGCATTCTAAAATGCTATGCCTCTCCCACCCCCTGAAATTAGCCCAATAACATTTATTAAAAAGTAGGCCTACGTGACCCATATTATCAGATAGGTGTTATTTAAGTAATACGACTGATCACCTACAGTGTATAAAACTGATGAAGCATAGTGGCTATATATAGATGGCTGAAACATGGGGTTAACAATTTGCATTAATACCCCACTGGTCCAGATTAGATCAGACTAGATCCTCTTTTTGCTAGTTAGGCAGGTATTGATGAGCCCAGTATGGGGCAGTTGGACAGTGGAGGAAGCAGAGCTGTTAGCAGCACACAGGTGCTGCTGATACTGCTGCTTcatctgctgttgctgctgctcctACTGCTATTGCTGCTtcgtctgctgctgctgcttggtTCTTCAGCAGAGTCAAAAGAACCAACCTATCCAACCGATGGAGCTGCTGGTCCATGATCAGCCACAGGAGGCTAGACAGAAGCCCAGGGTGGAGTTGGGCTCTGGCTTGGGCATGGGAAGCCACATGGGTACTCTGGGTGGTGGGCAATTGTATTTGCCTCTGGGTCCGTTCATCATGCCAGAGTGGTTGGTGGAAAGGGGCTCCATGTGTTACGTGGATAAGCCGGGAACCAGGCGACAGAGGTTTGGTGCCAGGTTGGACTTGCTCGGCACGGGCACCAGATGGCAGATGGGTTCCATGCCAACGCTGCTTCCGAAGGCCTCTCACCACTTCTTCCAATTCTGACAGCCTGGGGCAATGTCTAAACAGTGTGTTCTGATTAGCTCAGAGTACGAGAGCATGGTGTTAACAACACTAAAAACTGTTGCCTACCTCTAGTTTTCAGAGGGTAATGTTTGACAAGGGTCTCTAAGTAAATCAAATGATTAAAAGGCAAATTAACCA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU671438 True 1251 TUCP 0.47 1 24904331 24905581

Neighbor

gene id symbol gene type direction distance location
LOC110527559 plcc coding upstream 1761 24872421 ~ 24902570 (+)
pdxkb LOC106574311 coding upstream 33420 24837284 ~ 24870911 (+)
LOC110527557 pknx1 coding upstream 84027 24811375 ~ 24820304 (+)
itsn1 LOC100286499 coding upstream 103887 24738197 ~ 24800444 (+)
setd4 setd4 coding upstream 171433 24723626 ~ 24732898 (+)
LOC110527561 LOC106575089 coding downstream 92341 24997922 ~ 25115994 (+)
LOC110527563 alg11 coding downstream 293585 25199166 ~ 25278853 (+)
spp2 spp2 coding downstream 297539 25203120 ~ 25213611 (+)
LOC110527567 LOC106575093 coding downstream 396219 25301800 ~ 25312514 (+)
LOC100136274 LOC100136274 coding downstream 409619 25315200 ~ 25321925 (+)
G588720 NA non-coding upstream 68463 24835598 ~ 24835868 (+)
G588717 NA non-coding upstream 71320 24832755 ~ 24833011 (+)
G588716 NA non-coding upstream 74033 24830088 ~ 24830298 (+)
G588687 NA non-coding upstream 101464 24800584 ~ 24802867 (+)
G588622 cbr1 non-coding upstream 181224 24694821 ~ 24723107 (+)
G588764 NA non-coding downstream 16696 24922277 ~ 24922579 (+)
G588765 NA non-coding downstream 18068 24923649 ~ 24924230 (+)
G588766 NA non-coding downstream 20350 24925931 ~ 24926133 (+)
G589081 NA non-coding downstream 62592 24968173 ~ 24968378 (+)
G589105 NA non-coding downstream 82429 24988010 ~ 24988480 (+)
G587660 NA other upstream 1096331 23807722 ~ 23808000 (+)
LOC110527540 LOC106533352 other upstream 1282962 23609520 ~ 23621369 (+)
G586685 NA other upstream 1889211 23010061 ~ 23015120 (+)
LOC110527523 stat1-2 other upstream 2200510 22684527 ~ 22722539 (+)
c7h10orf53 cssa17h10orf53 other upstream 2544104 22356500 ~ 22360232 (+)
G589734 NA other downstream 698024 25587088 ~ 25608606 (+)
G589933 NA other downstream 1098349 26003930 ~ 26025309 (+)
G590936 gart other downstream 1646973 26552554 ~ 26553542 (+)
G590949 LOC106575121 other downstream 1671826 26577407 ~ 26577933 (+)
G592134 NA other downstream 2577469 27483050 ~ 27483796 (+)

Expression


Co-expression Network