Gene
RNA
| Item | Value |
|---|---|
| gene id | G588764 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 24922277 ~ 24922579 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU671447 | True | 303 | lncRNA | 0.35 | 1 | 24922277 | 24922579 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527559 | plcc | coding | upstream | 19707 | 24872421 ~ 24902570 (+) |
| pdxkb | LOC106574311 | coding | upstream | 51366 | 24837284 ~ 24870911 (+) |
| LOC110527557 | pknx1 | coding | upstream | 101973 | 24811375 ~ 24820304 (+) |
| itsn1 | LOC100286499 | coding | upstream | 121833 | 24738197 ~ 24800444 (+) |
| setd4 | setd4 | coding | upstream | 189379 | 24723626 ~ 24732898 (+) |
| LOC110527561 | LOC106575089 | coding | downstream | 75343 | 24997922 ~ 25115994 (+) |
| LOC110527563 | alg11 | coding | downstream | 276587 | 25199166 ~ 25278853 (+) |
| spp2 | spp2 | coding | downstream | 280541 | 25203120 ~ 25213611 (+) |
| LOC110527567 | LOC106575093 | coding | downstream | 379221 | 25301800 ~ 25312514 (+) |
| LOC100136274 | LOC100136274 | coding | downstream | 392621 | 25315200 ~ 25321925 (+) |
| G588720 | NA | non-coding | upstream | 86409 | 24835598 ~ 24835868 (+) |
| G588717 | NA | non-coding | upstream | 89266 | 24832755 ~ 24833011 (+) |
| G588716 | NA | non-coding | upstream | 91979 | 24830088 ~ 24830298 (+) |
| G588687 | NA | non-coding | upstream | 119410 | 24800584 ~ 24802867 (+) |
| G588622 | cbr1 | non-coding | upstream | 199170 | 24694821 ~ 24723107 (+) |
| G588765 | NA | non-coding | downstream | 1070 | 24923649 ~ 24924230 (+) |
| G588766 | NA | non-coding | downstream | 3352 | 24925931 ~ 24926133 (+) |
| G589081 | NA | non-coding | downstream | 45594 | 24968173 ~ 24968378 (+) |
| G589105 | NA | non-coding | downstream | 65431 | 24988010 ~ 24988480 (+) |
| G589146 | NA | non-coding | downstream | 140532 | 25063111 ~ 25080006 (+) |
| G588755 | NA | other | upstream | 16696 | 24904331 ~ 24905581 (+) |
| G587660 | NA | other | upstream | 1114277 | 23807722 ~ 23808000 (+) |
| LOC110527540 | LOC106533352 | other | upstream | 1300908 | 23609520 ~ 23621369 (+) |
| G586685 | NA | other | upstream | 1907157 | 23010061 ~ 23015120 (+) |
| LOC110527523 | stat1-2 | other | upstream | 2218456 | 22684527 ~ 22722539 (+) |
| G589734 | NA | other | downstream | 681026 | 25587088 ~ 25608606 (+) |
| G589933 | NA | other | downstream | 1081351 | 26003930 ~ 26025309 (+) |
| G590936 | gart | other | downstream | 1629975 | 26552554 ~ 26553542 (+) |
| G590949 | LOC106575121 | other | downstream | 1654828 | 26577407 ~ 26577933 (+) |
| G592134 | NA | other | downstream | 2560471 | 27483050 ~ 27483796 (+) |
