G589093


Basic Information

Item Value
gene id G589093
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 24971613 ~ 24979107 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU671806
TTGCATATACTTTTACCCAAAGAAACTTTGTAGTTACAGTACATGTGTCACAGTCgtcatatggaggagaccaaggcgcagcgtggtaagcgtacatactTCTTTAATGAAAGAACAAACAATGAACAAACTATACAAAGCGAACCGTGACGctaatatggctagtgcagacaggcaactaaacatagaataagaacccacaaactacccaaggaatatggctacctaaatatggtccccaatcagagacaacgataaacagctgccactgattgagaaccaattcaggcaaccatagacatataaacacctagacttacaaaaaaccctagacaatacgaAACTAACAAAACACCCTCgtgaaaacaaagataactaaggtcagggcgtgacagtatgtgATCCATCCAGGAATTGGAATTGAAAACACAACCAATTCAGCCACAcaggatgattgtgttatgcacgtgagtgaggacccaaaagcggtttaacaaaaacagagtcctttaatgtcaaaacacaggtaagacatagatcctcttcaaatgtatatgatggcaaaataaacaacccgcagagagggcgacaaatgaaacataaagtccttctgaatatcacagaagagttccccttctagcagcagaggagaatagctgggttagagtccccttctagcagcagaggagattagctgggttgtagaggacagaggtacctgatcacacgtagcctcagatgaacaggcagattccgacaggacaggacaaggttgaagcaaacgagacgatagtttggttctggcatgagaaactcaaacgagaatctgacaaagacagaagcaggaacagagagagaaatagagacctaatcagagggaaaaaagggaacaggtgggaaaagggtgaacgaggtagttagagaagatgaggaacagctgggggaaggaggggaagagaaggtaacctaatacgaccagcagagggagacggagtaaagagaaagaacaggaacaagacataatatgagaATACATGACAGATTGCTACATTATCCATTTTGGGGGAAATGAGCACCTCTAAAAGCTCACAGGACATTACAGGGCAACTGTAATGTCAAGCAGTTGTGCCCGTGGTTCGATGTAGAGTGATCAGAGGATGGTTACATAGGTATGCATAAAGTGGAGGAGTGGGAGGCTTGTCTGACTCCAACAGCACTGGGAGTCACATGAGCCTTTTCTGTGGTGTCCTCAGAATGTAATGTTACTGCTCTACTGAGCATTCCGTCATGAGACTTTGTTTATTTTGTTCTGGGTAAATTACTTTTCCTGAGAATTCTTTCTAACTTGTTCTTGATTTAATTTTACGTGACTCTTGCATGAAATTAGTATTTTAAGCATACATTTTTGTATACTGTGTTGATAACAAACATTGATACTAGATAGTCCATGGCAtctacagttgaattcggaagattacatacacttaggttggagtcattaaaactagtttttcaaccactccacaaatgtcttgttaacaaactatagttttggcaagtcggttaggacatctactttgtgcatgacgcaagtaatttttccaacaattgtttacagacagataatttcacttaattcacagtgggtcagaagttaaaatacactaagttgactgcctttaaacagctcggaaaattccagaaatgtatgtcatggctttagaagcttctgataggctaattgacataatttgagtcaattggaggtgtacctgtagatgtatttcaaggccaactttcaaactcagtgcctctttgcttgacgtcatggggaaatcaaaagaaatcagccaagacctcagaaaaacattttTAGACCACagtgttcatccttgggagcatatttccaaacgcctgaaggtaccacgttcatttgtacaaacaatagtttgcaagtataaacacgataggaccacgcagctgtcataccgctcatcAAGGAGATGCGGTCTGTCcgctagagatgaatgtactttggtgcgaaaagtgcaaatcaatcccagaacaacagcaaaggaccttgtgaagatgctggaggaaacaggtataaaattatctatattcacagtaaaaacgagtcctatatcgacataacctgaaaggccgctcagcaaggaagaagccactgctacaaaactgccataaaaaagccagtctacggtttgcaactgcacatggggacaaagattatactttttgaagaaatgtcctctggtctgatgaaacaaaatagaactgtttggccataatggccaccgttatgtttggaggaaaaagggggagccaaagaacaatcaatcaaatgtatttataaagcccttcttacatcagctgatgtcacaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgaagaagcacagtggctaggaaaaactcccgggaaaggccagaacctaagaagaagaaacctagagaggaaccatcccaaccgtgaagcacgcgggtggcagcatcatgttgtgggggtgctttgctgcaagagggactggtgcacttcacaaaatagatggctcatgaggatggaacattatgtggatacattgaagcaacatctcaagacatcagtcaggaggttaaaacttggtcgcaaatgggtcttccaaatgggtaatgaccccaagcatacttccaaagttgtggcaaaatggcttaaggacaagaaaatcaaggtattggagtggctatcacaatgccctgacctcaatcctatagaacatttgtggggagAACTGACAaattgtgtgcgagcaaggaggcctacaaaacctgactcagttacaccagctctgtcaagaggaatgagCCATAACtcatccaacttattgtaggaagcttgtggaaggctacccgaaacgtttgacccaagttaaacaatttaaaggcaatgctacaaaatactaattgagtgtatgcaaacttctgacccacttggaatgtgacgaaagaaataaaagctgaaatgaatgaaaatgaaatgaaaaatgaaaaagtggtgatcctaactgacctactacagggatttttactaggattgaatgtcaggaattgtgaaaaactgagtttatgcgtatttggctaaggtgtatgtaaactttcaacttcaactgtacttgcACAAATTGTCCCAAGCAATTATATGGGAAACCAGACCATCAAGGAGAACCAGTATAGATGATAGATGGCTATTGCTTACAGTAAGTACTATATATTTcagaatgtacagtgcattcagaccccttgacttttcccacattttgttacgttat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU671806 True 3372 TUCP 0.41 2 24971613 24979107

Neighbor

gene id symbol gene type direction distance location
LOC110527560 LOC106575088 coding downstream 6282 24915977 ~ 24965331 (-)
LOC110528817 LOC106575139 coding downstream 148126 24821195 ~ 24823487 (-)
cryzl1 LOC106575083 coding downstream 233617 24732997 ~ 24737996 (-)
cbr1 cbr1 coding downstream 247990 24721469 ~ 24723623 (-)
LOC110527556 LOC106575147 coding downstream 260453 24709221 ~ 24711160 (-)
LOC110527562 tm163 coding upstream 142161 25121268 ~ 25164357 (-)
LOC110527565 LOC106575142 coding upstream 236112 25215219 ~ 25290844 (-)
fastkd2 fastkd2 coding upstream 348028 25327135 ~ 25337360 (-)
retreg2 LOC100380703 coding upstream 367289 25346396 ~ 25358486 (-)
LOC110528818 NA coding upstream 379800 25358907 ~ 25361270 (-)
G589059 NA non-coding downstream 26474 24944921 ~ 24945139 (-)
G589058 NA non-coding downstream 28877 24942514 ~ 24942736 (-)
G589057 NA non-coding downstream 30298 24941088 ~ 24941315 (-)
G589056 NA non-coding downstream 33770 24937635 ~ 24937843 (-)
G589488 NA non-coding upstream 99943 25079050 ~ 25079876 (-)
G589499 NA non-coding upstream 117303 25096410 ~ 25097900 (-)
G589543 NA non-coding upstream 194281 25173388 ~ 25173628 (-)
G589530 NA non-coding upstream 209628 25188735 ~ 25192468 (-)
G588987 NA other downstream 142913 24828488 ~ 24828700 (-)
G587242 NA other downstream 1593912 23375012 ~ 23377701 (-)
LOC110527533 s100b other downstream 1806404 23161894 ~ 23165209 (-)
G586878 NA other downstream 1884476 23084490 ~ 23087137 (-)
LOC110527529 ngl1 other downstream 2159110 22807676 ~ 22812906 (-)
G589529 NA other upstream 222299 25201406 ~ 25278874 (-)
G589705 NA other upstream 565628 25544735 ~ 25545418 (-)
G590443 NA other upstream 1178886 26157993 ~ 26158305 (-)
LOC110527590 LOC106575121 other upstream 1599062 26575613 ~ 26585525 (-)

Expression


Co-expression Network