G589499


Basic Information

Item Value
gene id G589499
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 25096410 ~ 25097900 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU672259
gaaaataagtatttcaaatacacatgtatttgaaccAGGGGCGGAAATTTCATTAGGGACAAGGGAGTCATGTCCACAATTGGTTCCTACCATTCCGATTGGAACCCGATTTGAATCCAGGAActtctgtgtatgtctgtgtgtggggACTGGAATGCTGTATAGCAACACTATAGCTTTCACTTGCTTAACTGCTTTgttaatgactgtgtgtgtgtgtgtgtgatctatgGTCTTGGATGGATTCAGttatcattttttttgtcaatgatctacacaaaatactctatactgtcaaagtggaagaaaaaggaaaaataaaacactactaTATCTTGATAAAATAAGTATTTACCCCCTTGAGCATATGATAGATATGTTAGAAATACCTTTGGAGTCTTTTGGGCTAAGTCTCAAAGtgtggattgtgcaatatttgcccatatttttttttaatcaagattcttcaagctctgtcaagttggttgtcttgacatagattttcaagcagatttaagtcaaaactgtaaaatCGGCCACTCAGGATCATTCACTAGAAAAAGCTAGAAAAGCAAAGGAGGGGAGGAAATGGGAGGGAGATATCATAGGAGGAAAGGGATCTAGGAAAGAAAATTAGAAAAGGGATCTAAGAAAGGAGGAAATTAAGCTATAAATAGAGGAGAGTCATCTGCTTAgactgaggctgtcctaatatggacactatAGCCACATTTGTGGATTGTATAACATAAAACTAGTGGAAAAGAGAGTCTGAAAATTCTGTAAACAACAAATACAAAATCCACAAGCAAATTTGTATGCGCAAATGCACATTCCAGAGTTGtaaattgtcctgctgaaagcagactgaactaggttttcctctaggagttTTAGCCTGTGCTTATCTCCAttccttttattttttatcctgaaaaactctccagCCCTTAAtcattacaagcatacccataacatgatgcagccaccactatgcttgaaaatatggagagtggtactcagcaatgtgttgtattggatttgccccaaacataacactttgtattcaggacaaaaagtgaattgctttgccacatttttttgcagtattactttagtgccttgttgcaaacaggatgcatgttttggaatatttgtattctgtacaggcttccttcttttactatgtcaattaggttagtattgtggagtaactacaatgttgttgatccattctcagttttctcctatcacagccattaaactgttttaaagtcaccattggcctaatggtgaaatccctgagctgtttccttcctctttggcaaataagttaggaaggacgccagtATCTTTTGTGGCATACAgaaggtgatggctccatctgctggacgtgccaggtctcgacAGGCTCTCCGCCCAGGACTAATTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU672259 True 1432 lncRNA 0.38 2 25096410 25097900

Neighbor

gene id symbol gene type direction distance location
LOC110527560 LOC106575088 coding downstream 131079 24915977 ~ 24965331 (-)
LOC110528817 LOC106575139 coding downstream 272923 24821195 ~ 24823487 (-)
cryzl1 LOC106575083 coding downstream 358414 24732997 ~ 24737996 (-)
cbr1 cbr1 coding downstream 372787 24721469 ~ 24723623 (-)
LOC110527556 LOC106575147 coding downstream 385250 24709221 ~ 24711160 (-)
LOC110527562 tm163 coding upstream 23368 25121268 ~ 25164357 (-)
LOC110527565 LOC106575142 coding upstream 117319 25215219 ~ 25290844 (-)
fastkd2 fastkd2 coding upstream 229235 25327135 ~ 25337360 (-)
retreg2 LOC100380703 coding upstream 248496 25346396 ~ 25358486 (-)
LOC110528818 NA coding upstream 261007 25358907 ~ 25361270 (-)
G589488 NA non-coding downstream 16534 25079050 ~ 25079876 (-)
G589059 NA non-coding downstream 151271 24944921 ~ 24945139 (-)
G589058 NA non-coding downstream 153674 24942514 ~ 24942736 (-)
G589057 NA non-coding downstream 155095 24941088 ~ 24941315 (-)
G589543 NA non-coding upstream 75488 25173388 ~ 25173628 (-)
G589530 NA non-coding upstream 90835 25188735 ~ 25192468 (-)
G589556 NA non-coding upstream 100027 25197927 ~ 25198249 (-)
G589558 NA non-coding upstream 101242 25199142 ~ 25200889 (-)
G589093 NA other downstream 117303 24971613 ~ 24979107 (-)
G588987 NA other downstream 267710 24828488 ~ 24828700 (-)
G587242 NA other downstream 1718709 23375012 ~ 23377701 (-)
LOC110527533 s100b other downstream 1931201 23161894 ~ 23165209 (-)
G586878 NA other downstream 2009273 23084490 ~ 23087137 (-)
G589529 NA other upstream 103506 25201406 ~ 25278874 (-)
G589705 NA other upstream 446835 25544735 ~ 25545418 (-)
G590443 NA other upstream 1060093 26157993 ~ 26158305 (-)
LOC110527590 LOC106575121 other upstream 1480269 26575613 ~ 26585525 (-)

Expression


Co-expression Network