G589224


Basic Information

Item Value
gene id G589224
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 25197969 ~ 25198258 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU671941
tatctactataatcaacagcgttttgtgaattactcccgtgatgcactcactggtctgtctgaacagCTTGAGGCCACATCTAGGGTTGCCAGACAGAATAGACTTGCTTTGGATATGCTTTTTGCCAGTCAGGGGGGTGTCTGCAAGATGTTCGGTGAACAATGTTGCACGTATATTCCTAATAACACCAGACCAGATGGTAGTATATCTAAGGCCCTTAATGGGCTTGATGCACTATCTGCTGAGATGAGGTCCATGGCGGGGGTTGAGGAGTCTGAACTGTTCTCTT

Function

NR:

description
uncharacterized protein LOC110503969

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU671941 True 290 lncRNA 0.46 1 25197969 25198258

Neighbor

gene id symbol gene type direction distance location
LOC110527561 LOC106575089 coding upstream 81975 24997922 ~ 25115994 (+)
LOC110527559 plcc coding upstream 295399 24872421 ~ 24902570 (+)
pdxkb LOC106574311 coding upstream 327058 24837284 ~ 24870911 (+)
LOC110527557 pknx1 coding upstream 377665 24811375 ~ 24820304 (+)
itsn1 LOC100286499 coding upstream 397525 24738197 ~ 24800444 (+)
LOC110527563 alg11 coding downstream 908 25199166 ~ 25278853 (+)
spp2 spp2 coding downstream 4862 25203120 ~ 25213611 (+)
LOC110527567 LOC106575093 coding downstream 103542 25301800 ~ 25312514 (+)
LOC100136274 LOC100136274 coding downstream 116942 25315200 ~ 25321925 (+)
mdh1b mdh1b coding downstream 139153 25337411 ~ 25341310 (+)
G589214 NA non-coding upstream 1166 25176437 ~ 25196803 (+)
G589220 NA non-coding upstream 3239 25188359 ~ 25194730 (+)
G589211 NA non-coding upstream 23134 25174440 ~ 25174835 (+)
G589207 NA non-coding upstream 28938 25166906 ~ 25169031 (+)
G589146 NA non-coding upstream 117963 25063111 ~ 25080006 (+)
G589234 NA non-coding downstream 35650 25233908 ~ 25234447 (+)
G589239 NA non-coding downstream 42318 25240576 ~ 25241673 (+)
G589245 NA non-coding downstream 55997 25254255 ~ 25257164 (+)
G589252 NA non-coding downstream 74046 25272304 ~ 25310601 (+)
G588755 NA other upstream 292388 24904331 ~ 24905581 (+)
G587660 NA other upstream 1389969 23807722 ~ 23808000 (+)
LOC110527540 LOC106533352 other upstream 1576600 23609520 ~ 23621369 (+)
G586685 NA other upstream 2182849 23010061 ~ 23015120 (+)
LOC110527523 stat1-2 other upstream 2494148 22684527 ~ 22722539 (+)
G589734 NA other downstream 405347 25587088 ~ 25608606 (+)
G589933 NA other downstream 805672 26003930 ~ 26025309 (+)
G590936 gart other downstream 1354296 26552554 ~ 26553542 (+)
G590949 LOC106575121 other downstream 1379149 26577407 ~ 26577933 (+)
G592134 NA other downstream 2284792 27483050 ~ 27483796 (+)

Expression


Co-expression Network