G589529


Basic Information

Item Value
gene id G589529
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 25201406 ~ 25278874 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU672308
gaatgatCTCATCCGTTTCCAACTACAGAAACGAGTTCAGAATCTTAGATGGTGGGTGACAAAATCCTCTCGTCTGTTCAAAGATTTAGTTTTGTCCACTGATTCTCTTATAGTATAGCCTGTATATTATGAGCTGAGACTGGGCTCGGACAGTATAGAATAGAAAACCTGCATTATCCATTAAAGATATACAACTTGCCTTCACGTTCTTTGCTTTCCAGGCCCAGGTAAATATGACCTATTTTAAAAGATGCATTACACACATTACTCTCTTCACATCTGTTGTAGAAAAGCTTTCACTTCCCAGATATTGCAAAGGTGCATACGGATGGGagtggtttttattttattaggatccccgtttattaggatccccgtttattaggatccccatttcTTAGGATCCCCGACAGCTAGTCCAGCTGGGGTCCGACACGAAAACGACATAACAGACAAAAGACTTCACAATTGACATGCATTTCAAATCATGAACATGTGTTGTGCGTTTGCATctgtcagttacacatacatgtcagtaaaTACACACCACAAAAGAGATCAGATCTCACAATGCCTAGAGAAGTGTTTTTCACATcaacactgtatgtagcctaGCGGTAAGGAGCGTTGGGCCGGTAGCAGAGGTCGCTGGTTTAAATCCCTAGCCAACgaggtgaaaaatatgttgatgtgcccGTGAGCAAGGCAATTGCTCCTGTGTTTCACATGGGTGAATTGGAAAAGGTTTATTTTTCATATCCCAATCAGTCAGGCAGGGATCAGAAATTGCGGATCCCTGACTGAGCGGGTATGAAAAATAAACCATTTCCAATTCACCCGTGTGAAATAAGACTAAATGTAAGCACCCCATCTTATTATAACAATCTTCTGAGATTTGTAGTTTGACTGCAAAAAGCCAACCTGGAATACCATCAAAAACACAGTTGTGTCCAGTCCTTGCTAGACCAGCACTAATCTAGTCTACCAGCCGGCTCTCTGTATGCGTTCAAAATTGAGACTGGGAACATGAAGGAGGTTAGACGGAACACTAAAAATGTTGTGCCTCAAGTACAAATACATTGGAAAAAATGGAACGGGGTCTAGAAAACATAAATACTAAACATATAACAAGACCCTCTAGAAAGAGAGTGGACACCTGGACTGACATGTCAATAAATGCAGCTCTAATTTAAGTCAACGTATTTTCTTGTGCACTTTAACACAAACGGTCTCCTATGTCAACTAAAGGAGTGGCTAGTATGCCAAAATGTGCCATGGCAGTACAAGCATGAGTTTTAGTCCCtcaaccaccaacacacacacccatgagcctgtgacacacacacacgcacactccccCACCCATACCCCTCATCGCGCCAGTGTCCATATGAGAGGCTCCATGGTAGCCAGGAAGCAGGCCTCAAACTCCTGGTCGGAGAAGCGAGTGACTGAGAGGCAAGCGTGGCGTCGGATCTCCAGACGGGCCGAGGGTGACGGGCCAGGATCCGCTCAATGGCGTCTGCGTAGCCATCCTCATCCTCGGCCAGGAAGCCCGTCTGGTCTCCATCATAGGGCACCACAATGTCCAGCCTGGGGCCTCCAGACCTGTGAGCCAGGATGACGGTCCCAGCCGCCATGCACTCCAC

Function

NR:

description
PREDICTED: asparagine-linked glycosylation protein 11 homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU672308 True 1649 TUCP 0.45 2 25201406 25278874

Neighbor

gene id symbol gene type direction distance location
LOC110527562 tm163 coding downstream 37049 25121268 ~ 25164357 (-)
LOC110527560 LOC106575088 coding downstream 236075 24915977 ~ 24965331 (-)
LOC110528817 LOC106575139 coding downstream 377919 24821195 ~ 24823487 (-)
cryzl1 LOC106575083 coding downstream 463410 24732997 ~ 24737996 (-)
cbr1 cbr1 coding downstream 477783 24721469 ~ 24723623 (-)
fastkd2 fastkd2 coding upstream 48261 25327135 ~ 25337360 (-)
retreg2 LOC100380703 coding upstream 67522 25346396 ~ 25358486 (-)
LOC110528818 NA coding upstream 80033 25358907 ~ 25361270 (-)
cnppd1 LOC106575101 coding upstream 84567 25363441 ~ 25371970 (-)
abcb6a LOC106574324 coding upstream 93236 25372110 ~ 25414754 (-)
G589558 NA non-coding downstream 517 25199142 ~ 25200889 (-)
G589556 NA non-coding downstream 3157 25197927 ~ 25198249 (-)
G589530 NA non-coding downstream 8938 25188735 ~ 25192468 (-)
G589543 NA non-coding downstream 27778 25173388 ~ 25173628 (-)
G589590 NA non-coding upstream 22580 25301454 ~ 25315300 (-)
G589575 NA non-coding upstream 46411 25325285 ~ 25326280 (-)
G589631 NA non-coding upstream 127837 25406711 ~ 25407033 (-)
G589639 NA non-coding upstream 135132 25414006 ~ 25414225 (-)
G589648 NA non-coding upstream 145988 25424862 ~ 25425294 (-)
G589093 NA other downstream 222299 24971613 ~ 24979107 (-)
G588987 NA other downstream 372706 24828488 ~ 24828700 (-)
G587242 NA other downstream 1823705 23375012 ~ 23377701 (-)
LOC110527533 s100b other downstream 2036197 23161894 ~ 23165209 (-)
G586878 NA other downstream 2114269 23084490 ~ 23087137 (-)
G589705 NA other upstream 265861 25544735 ~ 25545418 (-)
G590443 NA other upstream 879119 26157993 ~ 26158305 (-)
LOC110527590 LOC106575121 other upstream 1299295 26575613 ~ 26585525 (-)
G591808 NA other upstream 1887301 27166175 ~ 27166468 (-)
G592298 NA other upstream 2204083 27482957 ~ 27483780 (-)

Expression


Co-expression Network