G589590


Basic Information

Item Value
gene id G589590
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 25301454 ~ 25315300 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU672370
CATGTTGGCAgcactggagagggagaggaggatcgTGGGTATCCAGTAAACGTTCATCTTGAAAGTTCTCAGTTTTGTCGTGAAACTGAAGCTCCCCTGGTATCTTTTTACAGTGCACAACAATCAGGGTAAATGCAATGATACGCTGTATGCCAAACAGAACGAGACAGTGACTGCTCTGCTCTACCTAAACATACCTAAACATACAACACATGCTCGTCACACGATGACAGCGTGCATCTCATAACATCCTTCCCTGTCACCTGTCACCTGTCACTGTGAACAACAATCTGTCCCTCGTCGACTGTAAGCAACTCTGTAAGCAACTCTCTCTGCTGCACATCTAACAGGGTGACTGGCTGCACATCTAACAGGGTGACTGACTGCACGGACTCTTCAGTAAAAAAAACATCCGCACTCTGAACTTCATAAGTTTCCACCCTCTACCGGTGTGTGACCTTTGATGGGCTTGGAACCTCGTATCGTATTACTCATCTTTTGATTTTCTCCTCCATATCATATTTCACTGCTTCTGGTAAAACTCGCAGAGACTCACCCAGGTTTCTCTGTTGCTATGTGACTGTCTCCTGCGACAGACTGTCAGGAAAACTCTGATATTAtcacagagacaggggagtatTACATCGAATCGTATCACCATACATCTCGTTGTGGTCACAGTGTAGGCCAACATTTCCTGTTTGTCATGATTTTTCTGTGCAAGAATTTTCCAGAGACACTTCATATCATACAGGTATCTTCATAGGAAATGTTGTGTGCTATAGTTTGTTTGGGGGGGGAGTTGAGAGATTTACTGATCTCCTGCACACTacagctatacacacacacacagtcatgtcaTGCATACATACATTTTTGGTGTTGGTGGCCCCTTCGAGGATAGAACCCACAGTCCTGGGGTTGCAAgcatcatgctctaccaactgagaccTAAAGAGAGTGGAGTCTTCCTAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU672370 True 977 lncRNA 0.45 2 25301454 25315300

Neighbor

gene id symbol gene type direction distance location
LOC110527565 LOC106575142 coding downstream 10610 25215219 ~ 25290844 (-)
LOC110527562 tm163 coding downstream 137097 25121268 ~ 25164357 (-)
LOC110527560 LOC106575088 coding downstream 336123 24915977 ~ 24965331 (-)
LOC110528817 LOC106575139 coding downstream 477967 24821195 ~ 24823487 (-)
cryzl1 LOC106575083 coding downstream 563458 24732997 ~ 24737996 (-)
fastkd2 fastkd2 coding upstream 11835 25327135 ~ 25337360 (-)
retreg2 LOC100380703 coding upstream 31096 25346396 ~ 25358486 (-)
LOC110528818 NA coding upstream 43607 25358907 ~ 25361270 (-)
cnppd1 LOC106575101 coding upstream 48141 25363441 ~ 25371970 (-)
abcb6a LOC106574324 coding upstream 56810 25372110 ~ 25414754 (-)
G589525 NA non-coding downstream 86930 25203119 ~ 25214524 (-)
G589558 NA non-coding downstream 100565 25199142 ~ 25200889 (-)
G589556 NA non-coding downstream 103205 25197927 ~ 25198249 (-)
G589530 NA non-coding downstream 108986 25188735 ~ 25192468 (-)
G589543 NA non-coding downstream 127826 25173388 ~ 25173628 (-)
G589575 NA non-coding upstream 9985 25325285 ~ 25326280 (-)
G589631 NA non-coding upstream 91411 25406711 ~ 25407033 (-)
G589639 NA non-coding upstream 98706 25414006 ~ 25414225 (-)
G589648 NA non-coding upstream 109562 25424862 ~ 25425294 (-)
G589652 NA non-coding upstream 113446 25428746 ~ 25428977 (-)
G589529 NA other downstream 22580 25201406 ~ 25278874 (-)
G589093 NA other downstream 322347 24971613 ~ 24979107 (-)
G588987 NA other downstream 472754 24828488 ~ 24828700 (-)
G587242 NA other downstream 1923753 23375012 ~ 23377701 (-)
G589705 NA other upstream 229435 25544735 ~ 25545418 (-)
G590443 NA other upstream 842693 26157993 ~ 26158305 (-)
LOC110527590 LOC106575121 other upstream 1262869 26575613 ~ 26585525 (-)
G591808 NA other upstream 1850875 27166175 ~ 27166468 (-)
G592298 NA other upstream 2167657 27482957 ~ 27483780 (-)

Expression


Co-expression Network