Gene
RNA
| Item | Value |
|---|---|
| gene id | G589305 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 25358907 ~ 25359795 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU672042 | True | 423 | lncRNA | 0.35 | 2 | 25358907 | 25359795 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527571 | LOC106575097 | coding | upstream | 12600 | 25342711 ~ 25346307 (+) |
| mdh1b | mdh1b | coding | upstream | 17597 | 25337411 ~ 25341310 (+) |
| LOC100136274 | LOC100136274 | coding | upstream | 36982 | 25315200 ~ 25321925 (+) |
| LOC110527567 | LOC106575093 | coding | upstream | 46393 | 25301800 ~ 25312514 (+) |
| spp2 | spp2 | coding | upstream | 145296 | 25203120 ~ 25213611 (+) |
| LOC110528820 | LOC106575143 | coding | downstream | 407432 | 25767227 ~ 25769101 (+) |
| LOC110527576 | LOC106575106 | coding | downstream | 443755 | 25803550 ~ 25874508 (+) |
| LOC110527578 | LOC106575107 | coding | downstream | 534934 | 25894729 ~ 25903497 (+) |
| LOC110527579 | LOC106575110 | coding | downstream | 561924 | 25921719 ~ 25934364 (+) |
| mrpl39 | LOC106575108 | coding | downstream | 579752 | 25939547 ~ 25949320 (+) |
| G589292 | fastkd2 | non-coding | upstream | 23378 | 25333156 ~ 25335529 (+) |
| G589229 | NA | non-coding | upstream | 32271 | 25325549 ~ 25326636 (+) |
| G589252 | NA | non-coding | upstream | 48306 | 25272304 ~ 25310601 (+) |
| G589245 | NA | non-coding | upstream | 101743 | 25254255 ~ 25257164 (+) |
| G589239 | NA | non-coding | upstream | 117234 | 25240576 ~ 25241673 (+) |
| G589330 | NA | non-coding | downstream | 40003 | 25399798 ~ 25400173 (+) |
| G589339 | NA | non-coding | downstream | 46915 | 25406710 ~ 25406984 (+) |
| G589347 | NA | non-coding | downstream | 58660 | 25418455 ~ 25419032 (+) |
| G589358 | NA | non-coding | downstream | 71555 | 25431350 ~ 25431583 (+) |
| G589404 | NA | non-coding | downstream | 141055 | 25500850 ~ 25534186 (+) |
| G588755 | NA | other | upstream | 453326 | 24904331 ~ 24905581 (+) |
| G587660 | NA | other | upstream | 1550907 | 23807722 ~ 23808000 (+) |
| LOC110527540 | LOC106533352 | other | upstream | 1737538 | 23609520 ~ 23621369 (+) |
| G586685 | NA | other | upstream | 2343787 | 23010061 ~ 23015120 (+) |
| LOC110527523 | stat1-2 | other | upstream | 2655086 | 22684527 ~ 22722539 (+) |
| G589734 | NA | other | downstream | 243810 | 25587088 ~ 25608606 (+) |
| G589933 | NA | other | downstream | 644135 | 26003930 ~ 26025309 (+) |
| G590936 | gart | other | downstream | 1192759 | 26552554 ~ 26553542 (+) |
| G590949 | LOC106575121 | other | downstream | 1217612 | 26577407 ~ 26577933 (+) |
| G592134 | NA | other | downstream | 2123255 | 27483050 ~ 27483796 (+) |
