G589330


Basic Information

Item Value
gene id G589330
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 25399798 ~ 25400173 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU672072
gcATGTAATAATACATGTAATAATAACACAgggtactaaactcagcaaaaagagaaacgtccctttttcaggaccctgtctttcaaagattattcataaaaatccaaataacttcacagatcttcattgtaaagggtttaaacacggtttcccatgcttgttcaatgaaccataaacaatatatgaacatgcacctgtggaactgttgttaagacactaacagcttacagacagtaggcaattaattaaggtcacagttatgaaaaccagggacactaaagaggcctttctactgactctgaaaaacacaaaacatcGGATGTTATAGTTTTTCAGGTCCCATTGATAGCATAGTCTTCAACGGAGCCAATAGAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU672072 True 376 lncRNA 0.36 1 25399798 25400173

Neighbor

gene id symbol gene type direction distance location
LOC110527571 LOC106575097 coding upstream 53491 25342711 ~ 25346307 (+)
mdh1b mdh1b coding upstream 58488 25337411 ~ 25341310 (+)
LOC100136274 LOC100136274 coding upstream 77873 25315200 ~ 25321925 (+)
LOC110527567 LOC106575093 coding upstream 87284 25301800 ~ 25312514 (+)
spp2 spp2 coding upstream 186187 25203120 ~ 25213611 (+)
LOC110528820 LOC106575143 coding downstream 367054 25767227 ~ 25769101 (+)
LOC110527576 LOC106575106 coding downstream 403377 25803550 ~ 25874508 (+)
LOC110527578 LOC106575107 coding downstream 494556 25894729 ~ 25903497 (+)
LOC110527579 LOC106575110 coding downstream 521546 25921719 ~ 25934364 (+)
mrpl39 LOC106575108 coding downstream 539374 25939547 ~ 25949320 (+)
G589305 NA non-coding upstream 40003 25358907 ~ 25359795 (+)
G589292 fastkd2 non-coding upstream 64269 25333156 ~ 25335529 (+)
G589229 NA non-coding upstream 73162 25325549 ~ 25326636 (+)
G589252 NA non-coding upstream 89197 25272304 ~ 25310601 (+)
G589245 NA non-coding upstream 142634 25254255 ~ 25257164 (+)
G589339 NA non-coding downstream 6537 25406710 ~ 25406984 (+)
G589347 NA non-coding downstream 18282 25418455 ~ 25419032 (+)
G589358 NA non-coding downstream 31177 25431350 ~ 25431583 (+)
G589404 NA non-coding downstream 100677 25500850 ~ 25534186 (+)
G589734 NA non-coding downstream 186915 25587088 ~ 25608606 (+)
G588755 NA other upstream 494217 24904331 ~ 24905581 (+)
G587660 NA other upstream 1591798 23807722 ~ 23808000 (+)
LOC110527540 LOC106533352 other upstream 1778429 23609520 ~ 23621369 (+)
G586685 NA other upstream 2384678 23010061 ~ 23015120 (+)
LOC110527523 stat1-2 other upstream 2695977 22684527 ~ 22722539 (+)
G589933 NA other downstream 603757 26003930 ~ 26025309 (+)
G590936 gart other downstream 1152381 26552554 ~ 26553542 (+)
G590949 LOC106575121 other downstream 1177234 26577407 ~ 26577933 (+)
G592134 NA other downstream 2082877 27483050 ~ 27483796 (+)

Expression


Co-expression Network