G589339


Basic Information

Item Value
gene id G589339
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 25406710 ~ 25406984 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU672088
accggccgcgaccgggaggtccgtggggcgacgcacaattggcctagcgtcgcccgggttagggagggcttggtcggtaggggtgtccttgtctcatcgtgcaccagcgactcctgtggcgggctgggcgcagtgtgcgctaaccaaggtggccaggtgcacggtgtttcctccggcgcattggtgcggctggcttccgggttggatgtgcgctgtgttaaagaagcagcggcttggttggttgtgtatcggaggacgcatgactttcaaccttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU672088 True 275 lncRNA 0.64 1 25406710 25406984

Neighbor

gene id symbol gene type direction distance location
LOC110527571 LOC106575097 coding upstream 60403 25342711 ~ 25346307 (+)
mdh1b mdh1b coding upstream 65400 25337411 ~ 25341310 (+)
LOC100136274 LOC100136274 coding upstream 84785 25315200 ~ 25321925 (+)
LOC110527567 LOC106575093 coding upstream 94196 25301800 ~ 25312514 (+)
spp2 spp2 coding upstream 193099 25203120 ~ 25213611 (+)
LOC110528820 LOC106575143 coding downstream 360243 25767227 ~ 25769101 (+)
LOC110527576 LOC106575106 coding downstream 396566 25803550 ~ 25874508 (+)
LOC110527578 LOC106575107 coding downstream 487745 25894729 ~ 25903497 (+)
LOC110527579 LOC106575110 coding downstream 514735 25921719 ~ 25934364 (+)
mrpl39 LOC106575108 coding downstream 532563 25939547 ~ 25949320 (+)
G589330 NA non-coding upstream 6537 25399798 ~ 25400173 (+)
G589305 NA non-coding upstream 46915 25358907 ~ 25359795 (+)
G589292 fastkd2 non-coding upstream 71181 25333156 ~ 25335529 (+)
G589229 NA non-coding upstream 80074 25325549 ~ 25326636 (+)
G589252 NA non-coding upstream 96109 25272304 ~ 25310601 (+)
G589347 NA non-coding downstream 11471 25418455 ~ 25419032 (+)
G589358 NA non-coding downstream 24366 25431350 ~ 25431583 (+)
G589404 NA non-coding downstream 93866 25500850 ~ 25534186 (+)
G589734 NA non-coding downstream 180104 25587088 ~ 25608606 (+)
G588755 NA other upstream 501129 24904331 ~ 24905581 (+)
G587660 NA other upstream 1598710 23807722 ~ 23808000 (+)
LOC110527540 LOC106533352 other upstream 1785341 23609520 ~ 23621369 (+)
G586685 NA other upstream 2391590 23010061 ~ 23015120 (+)
LOC110527523 stat1-2 other upstream 2702889 22684527 ~ 22722539 (+)
G589933 NA other downstream 596946 26003930 ~ 26025309 (+)
G590936 gart other downstream 1145570 26552554 ~ 26553542 (+)
G590949 LOC106575121 other downstream 1170423 26577407 ~ 26577933 (+)
G592134 NA other downstream 2076066 27483050 ~ 27483796 (+)

Expression


Co-expression Network