G589347



Basic Information


Item Value
gene id G589347
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 25418455 ~ 25419032 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU672096
agagcatacaggtcgcattggtgggtagtatatggggctttggtgacaaaacaaacggcactgtgatagactgcatccaattgttgagtagagtgttggaggctattttgtaaatgacatcgccgaagtcaaggattggtaggatagtcagttttacaagggtatgtttggcagcatgagcgaaggaggctttgttatgaaataggaagccgattttagatttaattttggattggagatgcttaatgtgagtctggaaggagagtttacagtctagccagacacctaggtatttatagttgtccacatattctaagtcagaaccgtccagagtagtgatgctaggcgggcgggtgcgggcagcaatcagttgaagagcatgtatttagttttactagcatttaagagcagttggaggccacggaaggagtgttgtatggcattgaagctcgtttggagggtTGATAACAtagtatccaaagaagggccagatgtatacaaaatggagtcgtctgcatagaggtgggtCAAAGAATAACCGGCTGCatgagcaacatcattgatacagtgccttgcga

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU672096 True 578 lncRNA 0.44 1 25418455 25419032

Neighbor


gene id symbol gene type direction distance location
LOC110527571 LOC106575097 coding upstream 72148 25342711 ~ 25346307 (+)
mdh1b mdh1b coding upstream 77145 25337411 ~ 25341310 (+)
LOC100136274 LOC100136274 coding upstream 96530 25315200 ~ 25321925 (+)
LOC110527567 LOC106575093 coding upstream 105941 25301800 ~ 25312514 (+)
spp2 spp2 coding upstream 204844 25203120 ~ 25213611 (+)
LOC110528820 LOC106575143 coding downstream 348195 25767227 ~ 25769101 (+)
LOC110527576 LOC106575106 coding downstream 384518 25803550 ~ 25874508 (+)
LOC110527578 LOC106575107 coding downstream 475697 25894729 ~ 25903497 (+)
LOC110527579 LOC106575110 coding downstream 502687 25921719 ~ 25934364 (+)
mrpl39 LOC106575108 coding downstream 520515 25939547 ~ 25949320 (+)
G589339 NA non-coding upstream 11471 25406710 ~ 25406984 (+)
G589330 NA non-coding upstream 18282 25399798 ~ 25400173 (+)
G589305 NA non-coding upstream 58660 25358907 ~ 25359795 (+)
G589292 fastkd2 non-coding upstream 82926 25333156 ~ 25335529 (+)
G589229 NA non-coding upstream 91819 25325549 ~ 25326636 (+)
G589358 NA non-coding downstream 12318 25431350 ~ 25431583 (+)
G589404 NA non-coding downstream 81818 25500850 ~ 25534186 (+)
G589734 NA non-coding downstream 168056 25587088 ~ 25608606 (+)
G589909 NA non-coding downstream 469918 25888950 ~ 25893964 (+)
G588755 NA other upstream 512874 24904331 ~ 24905581 (+)
G587660 NA other upstream 1610455 23807722 ~ 23808000 (+)
LOC110527540 LOC106533352 other upstream 1797086 23609520 ~ 23621369 (+)
G586685 NA other upstream 2403335 23010061 ~ 23015120 (+)
LOC110527523 stat1-2 other upstream 2714634 22684527 ~ 22722539 (+)
G589933 NA other downstream 584898 26003930 ~ 26025309 (+)
G590936 gart other downstream 1133522 26552554 ~ 26553542 (+)
G590949 LOC106575121 other downstream 1158375 26577407 ~ 26577933 (+)
G592134 NA other downstream 2064018 27483050 ~ 27483796 (+)

Expression



Co-expression Network