G589914


Basic Information

Item Value
gene id G589914
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 25903820 ~ 25954846 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU672724
ctgacattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttaaccatcttgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU672724 True 411 lncRNA 0.44 2 25903820 25954846

Neighbor

gene id symbol gene type direction distance location
LOC110527578 LOC106575107 coding upstream 323 25894729 ~ 25903497 (+)
LOC110527576 LOC106575106 coding upstream 29312 25803550 ~ 25874508 (+)
LOC110528820 LOC106575143 coding upstream 134719 25767227 ~ 25769101 (+)
LOC110527571 LOC106575097 coding upstream 557513 25342711 ~ 25346307 (+)
mdh1b mdh1b coding upstream 562510 25337411 ~ 25341310 (+)
jam2a LOC106575111 coding downstream 1576 25956422 ~ 25972398 (+)
n6amt1 n6amt1 coding downstream 580937 26535783 ~ 26543684 (+)
LOC118965273 NA coding downstream 630673 26585519 ~ 26595151 (+)
LOC110527592 LOC106575150 coding downstream 1503848 27458694 ~ 27482580 (+)
LOC110527593 LOC106575124 coding downstream 1551063 27505909 ~ 27555139 (+)
G589909 NA non-coding upstream 9856 25888950 ~ 25893964 (+)
G589734 NA non-coding upstream 300005 25587088 ~ 25608606 (+)
G589404 NA non-coding upstream 369634 25500850 ~ 25534186 (+)
G589358 NA non-coding upstream 472237 25431350 ~ 25431583 (+)
G589936 NA non-coding downstream 17584 25972430 ~ 26018945 (+)
G589930 NA non-coding downstream 28823 25983669 ~ 25988528 (+)
G589995 NA non-coding downstream 78614 26033460 ~ 26033669 (+)
G590025 NA non-coding downstream 140096 26094942 ~ 26095408 (+)
G590024 NA non-coding downstream 140666 26095512 ~ 26096989 (+)
G588755 NA other upstream 998239 24904331 ~ 24905581 (+)
G587660 NA other upstream 2095820 23807722 ~ 23808000 (+)
LOC110527540 LOC106533352 other upstream 2282451 23609520 ~ 23621369 (+)
G586685 NA other upstream 2888700 23010061 ~ 23015120 (+)
G589933 NA other downstream 49084 26003930 ~ 26025309 (+)
G590936 gart other downstream 597708 26552554 ~ 26553542 (+)
G590949 LOC106575121 other downstream 622561 26577407 ~ 26577933 (+)
G592134 NA other downstream 1528204 27483050 ~ 27483796 (+)
G592445 lig4 other downstream 1748737 27703583 ~ 27707294 (+)

Expression


Co-expression Network