Gene
RNA
| Item | Value |
|---|---|
| gene id | G590620 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 26301191 ~ 26301503 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: cadherin-like and PC-esterase domain-containing protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU673489 | True | 271 | lncRNA | 0.42 | 2 | 26301191 | 26301503 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527587 | LOC106575119 | coding | downstream | 161242 | 26096153 ~ 26139949 (-) |
| LOC110527586 | LOC106574337 | coding | downstream | 215561 | 26060369 ~ 26085630 (-) |
| adamts1 | adamts1 | coding | downstream | 245744 | 26047765 ~ 26086045 (-) |
| cyyr1 | cyyr1 | coding | downstream | 255733 | 26035647 ~ 26045458 (-) |
| appa | app | coding | downstream | 275875 | 25983669 ~ 26025316 (-) |
| gart | gart | coding | upstream | 246166 | 26547669 ~ 26571079 (-) |
| LOC110527590 | LOC106575121 | coding | upstream | 274469 | 26575613 ~ 26585525 (-) |
| LOC110527591 | LOC106575122 | coding | upstream | 428135 | 26729638 ~ 27142641 (-) |
| fam155a | fam155a | coding | upstream | 1320203 | 27621706 ~ 27691752 (-) |
| LOC110527595 | lig4 | coding | upstream | 1401950 | 27703453 ~ 27707840 (-) |
| G590597 | NA | non-coding | downstream | 22377 | 26278577 ~ 26278814 (-) |
| G590584 | NA | non-coding | downstream | 30322 | 26270333 ~ 26270869 (-) |
| G590539 | NA | non-coding | downstream | 64332 | 26236659 ~ 26236859 (-) |
| G590430 | NA | non-coding | downstream | 154677 | 26146162 ~ 26146514 (-) |
| G590397 | NA | non-coding | downstream | 205788 | 26094958 ~ 26095403 (-) |
| G590623 | NA | non-coding | upstream | 2744 | 26304247 ~ 26304717 (-) |
| G590701 | NA | non-coding | upstream | 48624 | 26350127 ~ 26350596 (-) |
| G590865 | NA | non-coding | upstream | 170068 | 26471571 ~ 26471772 (-) |
| G591304 | NA | non-coding | upstream | 216960 | 26518463 ~ 26518756 (-) |
| G591305 | NA | non-coding | upstream | 217806 | 26519309 ~ 26519526 (-) |
| G590443 | NA | other | downstream | 142886 | 26157993 ~ 26158305 (-) |
| G589705 | NA | other | downstream | 755773 | 25544735 ~ 25545418 (-) |
| LOC110527565 | LOC106575142 | other | downstream | 1010586 | 25215219 ~ 25290844 (-) |
| G589529 | NA | other | downstream | 1022317 | 25201406 ~ 25278874 (-) |
| G589093 | NA | other | downstream | 1322084 | 24971613 ~ 24979107 (-) |
| G591808 | NA | other | upstream | 864672 | 27166175 ~ 27166468 (-) |
| G592298 | NA | other | upstream | 1181454 | 27482957 ~ 27483780 (-) |
| G594636 | LOC106593246 | other | upstream | 2722904 | 29024407 ~ 29026049 (-) |
| G594762 | NA | other | upstream | 3115352 | 29416855 ~ 29495130 (-) |
