G590914


Basic Information

Item Value
gene id G590914
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 26511001 ~ 26511348 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU673789
catcgagagactgaaatgttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattcgaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccaacaattttaaccatcttccctgtccctgct

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU673789 True 348 lncRNA 0.43 1 26511001 26511348

Neighbor

gene id symbol gene type direction distance location
jam2a LOC106575111 coding upstream 538603 25956422 ~ 25972398 (+)
mrpl39 LOC106575108 coding upstream 561681 25939547 ~ 25949320 (+)
LOC110527579 LOC106575110 coding upstream 576637 25921719 ~ 25934364 (+)
LOC110527578 LOC106575107 coding upstream 607504 25894729 ~ 25903497 (+)
LOC110527576 LOC106575106 coding upstream 636493 25803550 ~ 25874508 (+)
n6amt1 n6amt1 coding downstream 24435 26535783 ~ 26543684 (+)
LOC118965273 NA coding downstream 74171 26585519 ~ 26595151 (+)
LOC110527592 LOC106575150 coding downstream 947346 27458694 ~ 27482580 (+)
LOC110527593 LOC106575124 coding downstream 994561 27505909 ~ 27555139 (+)
plekha3 LOC106575131 coding downstream 1342950 27854006 ~ 27874521 (+)
G590906 NA non-coding upstream 7090 26503703 ~ 26503911 (+)
G590903 NA non-coding upstream 11585 26499090 ~ 26499416 (+)
G590897 NA non-coding upstream 16620 26494141 ~ 26494381 (+)
G590894 NA non-coding upstream 17411 26493253 ~ 26493590 (+)
G590877 NA non-coding upstream 29658 26480869 ~ 26481343 (+)
G590916 NA non-coding downstream 10026 26521374 ~ 26521573 (+)
G590924 NA non-coding downstream 19448 26530796 ~ 26531222 (+)
G590948 NA non-coding downstream 63765 26575113 ~ 26577377 (+)
G590960 NA non-coding downstream 86846 26598194 ~ 26598422 (+)
G589933 NA other upstream 485692 26003930 ~ 26025309 (+)
G589734 NA other upstream 902395 25587088 ~ 25608606 (+)
G588755 NA other upstream 1605420 24904331 ~ 24905581 (+)
G587660 NA other upstream 2703001 23807722 ~ 23808000 (+)
LOC110527540 LOC106533352 other upstream 2889632 23609520 ~ 23621369 (+)
G590936 gart other downstream 41206 26552554 ~ 26553542 (+)
G590949 LOC106575121 other downstream 66059 26577407 ~ 26577933 (+)
G592134 NA other downstream 971702 27483050 ~ 27483796 (+)
G592445 lig4 other downstream 1192235 27703583 ~ 27707294 (+)

Expression


Co-expression Network