XLOC_025265



Basic Information


Item Value
gene id XLOC_025265
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 21057854 ~ 21066838 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00052639
CTTCCAAGTccgaaaacttttttttcttctaaaatgcaaacacaaaataataataataataaaaaagaaaatctaaaacaACATATAACAAGGGAAAAAAATAACCATCTTAAAACAACtgttcaatcatttttttttccaaagccaTAATAGTCATTAACACGAATATCAAGTTTTCAGTTTCATCTTAAAAATGTCTAACATCTATTATCTTACGACTAAAAGGAAATTCACCATTTACCTAAAAAGTTCACTTTCTGCTTGGCAGTCGGTAAGACACAAAAATGACTATACCGACCCACTTATCTTCATTCCGGTGTCACTATTTTGCTAGTTTATCTACCAACACAATAGCAAAAGTGGtcttaaaaataccaaaaaaacaaaacaaaataaattggtCACAATACATGAAAACATAAGCCCTAAAA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00052639 True 431 lncRNA 0.29 2 21057854 21066838

Neighbor


gene id symbol gene type direction distance location
XLOC_025264 zwi coding upstream 26981 21025153 ~ 21030873 (+)
XLOC_025263 BX936284.1 coding upstream 142700 20913310 ~ 20915154 (+)
XLOC_025262 BX248239.1 coding upstream 377816 20679923 ~ 20680038 (+)
XLOC_025261 NA coding upstream 548341 20491202 ~ 20509513 (+)
XLOC_025260 nxph3 coding upstream 596152 20404912 ~ 20461702 (+)
XLOC_025266 NA coding downstream 70257 21137095 ~ 21143371 (+)
XLOC_025267 zgc:123295 coding downstream 122928 21189766 ~ 21198744 (+)
XLOC_025268 zgc:112038 coding downstream 133925 21200763 ~ 21218133 (+)
XLOC_025269 zgc:153968 coding downstream 158912 21225750 ~ 21230668 (+)
XLOC_025270 NA coding downstream 179059 21245897 ~ 21251807 (+)
XLOC_025429 BX649540.1 misc downstream 9181901 30248739 ~ 30249036 (+)
XLOC_025259 NA non-coding upstream 859235 20198302 ~ 20198619 (+)
XLOC_025271 NA non-coding downstream 245746 21312584 ~ 21320485 (+)
XLOC_025272 NA non-coding downstream 312158 21378996 ~ 21597908 (+)
XLOC_025274 NA non-coding downstream 863090 21929928 ~ 21997558 (+)

Expression



Co-expression Network