G590949 (LOC106575121)



Basic Information


Item Value
gene id G590949
gene name LOC106575121
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 26577407 ~ 26577933 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU673831
cacacacacacactcagacacacacccacacgacTTACCCACATCCAGGGGGTTGGTCATATAGACAGTGTCGGGTCCGACCCCAAAGATGAGTTGGTGGTGCCATGCGTCGggaacctcctctccctctggcaCTGCCAGCTGCATGTTCATGGTGGCCACGGGCACTGCCCCTTTCTGGATCCACTGTGCCAGCCAGGGTACCAGCCTCACCCGCCGGCGAGGGTGGAGGGGGAAGTGGCGACCCAGCACGCGCCCACCACTGGCCTGCTCCGCCCCAGCTATCAGCTGTGCGTGTGTGGCGCCtgtgagaggggaagagacagagaggagggtgtatcacagatatacaacagtggaaaataaatacagaaatacacaaacacgcacacacacagttgttAACACAGTTAACAGAGCATTTGGTGGTCATGGTTGAGGGCCTGTGGTCCAGTTAGAGAAATTGTGGTATAATGAGGAAGTTCTAAGGGTTGTGGTCAGAGTAGACTGCTGGATGAGTGTTGTGG

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU673831 True 527 TUCP 0.56 1 26577407 26577933

Neighbor


gene id symbol gene type direction distance location
n6amt1 n6amt1 coding upstream 33723 26535783 ~ 26543684 (+)
jam2a LOC106575111 coding upstream 605009 25956422 ~ 25972398 (+)
mrpl39 LOC106575108 coding upstream 628087 25939547 ~ 25949320 (+)
LOC110527579 LOC106575110 coding upstream 643043 25921719 ~ 25934364 (+)
LOC110527578 LOC106575107 coding upstream 673910 25894729 ~ 25903497 (+)
LOC118965273 NA coding downstream 7586 26585519 ~ 26595151 (+)
LOC110527592 LOC106575150 coding downstream 880761 27458694 ~ 27482580 (+)
LOC110527593 LOC106575124 coding downstream 927976 27505909 ~ 27555139 (+)
plekha3 LOC106575131 coding downstream 1276365 27854006 ~ 27874521 (+)
LOC100653476 LOC106575134 coding downstream 1567603 28145536 ~ 28168201 (+)
G590948 NA non-coding upstream 30 26575113 ~ 26577377 (+)
G590924 NA non-coding upstream 46185 26530796 ~ 26531222 (+)
G590916 NA non-coding upstream 55834 26521374 ~ 26521573 (+)
G590914 NA non-coding upstream 66059 26511001 ~ 26511348 (+)
G590960 NA non-coding downstream 20261 26598194 ~ 26598422 (+)
G591014 NA non-coding downstream 112338 26690271 ~ 26690499 (+)
G591018 NA non-coding downstream 118951 26696884 ~ 26697106 (+)
G591023 NA non-coding downstream 151716 26729649 ~ 26732886 (+)
G591037 NA non-coding downstream 161377 26739310 ~ 26744376 (+)
G590936 gart other upstream 23865 26552554 ~ 26553542 (+)
G589933 NA other upstream 552098 26003930 ~ 26025309 (+)
G589734 NA other upstream 968801 25587088 ~ 25608606 (+)
G588755 NA other upstream 1671826 24904331 ~ 24905581 (+)
G587660 NA other upstream 2769407 23807722 ~ 23808000 (+)
G592134 NA other downstream 905117 27483050 ~ 27483796 (+)
G592445 lig4 other downstream 1125650 27703583 ~ 27707294 (+)
G593144 NA other downstream 2257276 28835209 ~ 28841083 (+)
G593171 NA other downstream 2314230 28892163 ~ 28892425 (+)

Expression



Co-expression Network