G591023


Basic Information

Item Value
gene id G591023
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 26729649 ~ 26732886 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU673907
CAGGACATGTTTATTTACAGCTGATAAAATGACAGGAGGTTTGTTACAGGGTGTTCCACAGGCTACGGCCACATCAACAGTTTCCACCCCCTGCGTAAGCACACTCAGTCTGGGGAGTCCAGAGGGGGACAAGAGGCGGGGACACAATACACAGAGCTAGAAACACACCAGTACTCTCTATGGAGACAGACTGAGACGGAGTCCGAGGGTGAGAGATGTGGGAGGAGGGAACGGGGGAATAGACTGATATTCAGATATAAAATAACATGTACAAATCTCATGGCCATCAGGCAATGTGCTCCCTATTTACAGTTGTCTTAACAGGCTACAGAGCAACTCCAGGACTGCAGGTACAGTTTATCAATCGTGCTTTGGGAGAGAAAACAAAGCCAGTTTTATGGGGTAAAACCTATGGAGCAAAGAGGGGTATAAGGGATTCTCAGACACACATGCAGAGCGCTCCAGCCAGAGAATTGATGACAGCGATATACATGATAATCCATTTTTAAATTCAGGTTAAGACACACACAGCACACGCACACATGGACTTATgtacaggcacgcacacacacgcggtATCACACCCATTTCAGTGCTCAAATACTGTATGCTGCCTGTGCTAAAACCCTCGTTACTCTATCAGAGCTAACTGTCAGAGTCCACCTAGCTCTCAAGCAGTGGCAAATACTATATTTCCCAGAATTCACAGCGCCACTAATTAACGACAGGGTCATTACAAACTAATGGGCAGCACGACGGCGTCTGTCACGTCGACTCTGCAAGGAATAGTCCAGTCACCAAAGAGCATGTGCGCCGCTCCCTCGGCTAATGGCAAACAAGCCTCCTATTACATTTTAATTGAATGGTTTACACTGTTGCCACCGCAGCAAGGGACCAGGGGGACAATGGGCCGTGGGAAAACCAAGTCATGCTATTATCTTAATTACAGCCTCCATTGAAATGCTGTGAAGTGACCTAAgggcccactgtgtgtgtgttttcttgagGGTAAAGTGATGAATAGTAAAGAGCACTGTCACGTCGTCACTGAACTGTCAGACCAGAActaaaataagcttttttttcaGCTGGAGAGCGTTCAAACAagaaagcctgtttttgcttttgaaAAAAGACTCATCTTTTCCGGGTCTATTTACATACGAGCtttgtaaaatatgttttttttctctttacCTATTTACATGACAACCTCAGAGAAAGAAAATGAACAGAAAAATGTTAATTGGTTTTCGATCATTAATATTGCCATTAAACTAAAATCAACTATAAATTAAGTGTATCTAAAAAAACATGACTGAAATACTTTGCGTGTGCCCGTGTCTAGTCTAACAGTTGAGAACAGAACAATTCAACATTCATTGGTTTTCACCTTTAGTCAATAGAATGATGGCACAACTTTCAAATGAAGCAAACAATATTGGACATGACTGTCTTTTCCTTTTTATAGACTactttttcccccaaaaaaactACTCACAGGACTGTATGACAACCACATTATTTTCACATTTCAATTTCATGTCAAcatcaattgtttttttttcctgtctttgagaaaaaaaaaatatttaaaaagaatTGAACGGCAAAAAATTTAAATAAACATTCAATGTAAAGCAGAGTAAccataaaataacacaaaatTGTCTCTGTTGTTTATTGTTGTGTTTTGAGGTGCGAGATAACAAGCGCTGTAGCCTGGTTACGGATACACCATGAAGACTGTTAACAAATACACAGGAAACATTACCTATAACTCTAAGGGCCCGGTACAGATTCATTGTCTGCCTAAAAACAGCAGTACTCATGGCATCACCATCAAAACCAGTGCTAAAACACAACCTTGCACAATCCTTACAATGAAGCCAGCTCATTGGTCAACAGTGGCAGGTGTAACTATGTTCATATTCTGTTCAAAATATTTTAAATTTCCTGGCTAACTTCCTGACCACATGAACCATGTGTGCTGACCACGTGGTCCTCTCAGATGTAACCACCTAGAACCATAATGGATCTTGGGGGATTCTTTCTAACTGGCTAACAAATAGCTATTATCATCAGAGATTATTTTCCTGTCATGCTGTCACCTTATGGATACACATGGTACACTAGTAAAATAATGGAGACAGACAGCTTGCATAGTTAACGCAAACGATTTTGATCAAATATGCTAAATATATTTACACAGCTCTCACACTCATAACAGCTCTCAAACTCATAACagcagacacattcagacacaccaATACGACTATCACTACAATGTGCAAAGGCACCTTGACAGTACCTGTTAATTTTTTTATCTTCTTTAAAAGAACAAATCAAAATGGTGGCATAACCAATGAGCTAGCTCAACATTCTCTGAGCCGGAAGCTCAAAGAGGAGCGGGCATAAAGGGGCGGATGTAACGTAGTACACAAGCATTAGACAGGACAGCCCAGACATCACATCTTAGACCAGAGCCGCAATAGAATACAGACGAGACTGCTGCAGTGAGGACAGGGTAGCTTACTCTGTAAATGCTACTGTAGGAGATCTTTTTTTACCAGGCACAGCGGACTTGAGTGGGAGTCGATAGTGGCGCTACTTATCCTTCAGACAGAGAGCTTTggcgtgtatgtgtttgtgtgtgtgtgtgtatgtatgtatgtatgtatgtgtgtaggatCAGGTGGGTTTTTGCAAATGGGGATTGAATAAGAGGgggaaggaaaataaataaatgcaacgGATAAGCAACGGCCAAggcataaaaaaaacaacaattaaaCCAAAGTCAGAGGAAAAAATGAAACAATATTACAATCACTGATCAACACGAAGTGTCTTCGACTGGAGCCATCTTGGATAGAAACAACATCATTGATTAGTCACATAAAAACGCTTGTTGTTGGGGTCTTCCTCTCTCTTATTTGTATTTACACACACTTTTCGTTTTTTCTCTGGGCCCTTATGGACATATAAGGGATatcatcatattttttttacgtgTCGTGTTTATTCTGTGTTTTGGTCTCAGGGTAGGATGCTCCGAAGTGTTCTCGTTTGCGGCGAGGGGCGAGAGGGCACACACATTTTATGCTTTACTGTCGTCCTGCTTTGTGTGGATGCTGTTGTCACTGTGCACTTTGATCTCGATCATGTCGGGCTTGAGCGTCTCCTTCCCGTTCTCCTCCTTCAGCGGTAGC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU673907 True 3212 lncRNA 0.41 2 26729649 26732886

Neighbor

gene id symbol gene type direction distance location
LOC118965273 NA coding upstream 134498 26585519 ~ 26595151 (+)
n6amt1 n6amt1 coding upstream 185965 26535783 ~ 26543684 (+)
jam2a LOC106575111 coding upstream 757251 25956422 ~ 25972398 (+)
mrpl39 LOC106575108 coding upstream 780329 25939547 ~ 25949320 (+)
LOC110527579 LOC106575110 coding upstream 795285 25921719 ~ 25934364 (+)
LOC110527592 LOC106575150 coding downstream 725808 27458694 ~ 27482580 (+)
LOC110527593 LOC106575124 coding downstream 773023 27505909 ~ 27555139 (+)
plekha3 LOC106575131 coding downstream 1121412 27854006 ~ 27874521 (+)
LOC100653476 LOC106575134 coding downstream 1412650 28145536 ~ 28168201 (+)
LOC118965275 LOC106575153 coding downstream 1488739 28221625 ~ 28258442 (+)
G591018 NA non-coding upstream 32543 26696884 ~ 26697106 (+)
G591014 NA non-coding upstream 39150 26690271 ~ 26690499 (+)
G590960 NA non-coding upstream 131227 26598194 ~ 26598422 (+)
G590948 NA non-coding upstream 152272 26575113 ~ 26577377 (+)
G591037 NA non-coding downstream 6424 26739310 ~ 26744376 (+)
G591160 NA non-coding downstream 194842 26927728 ~ 26929596 (+)
G591188 NA non-coding downstream 235192 26968078 ~ 27007218 (+)
G591872 NA non-coding downstream 526580 27259466 ~ 27259747 (+)
G591875 NA non-coding downstream 528244 27261130 ~ 27261343 (+)
G590949 LOC106575121 other upstream 151716 26577407 ~ 26577933 (+)
G590936 gart other upstream 176107 26552554 ~ 26553542 (+)
G589933 NA other upstream 704340 26003930 ~ 26025309 (+)
G589734 NA other upstream 1121043 25587088 ~ 25608606 (+)
G588755 NA other upstream 1824068 24904331 ~ 24905581 (+)
G592134 NA other downstream 750164 27483050 ~ 27483796 (+)
G592445 lig4 other downstream 970697 27703583 ~ 27707294 (+)
G593144 NA other downstream 2102323 28835209 ~ 28841083 (+)
G593171 NA other downstream 2159277 28892163 ~ 28892425 (+)

Expression


Co-expression Network