G591583


Basic Information

Item Value
gene id G591583
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 26968177 ~ 27007229 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU674492
gacgcacaccagagataacgtgcacaagcacttacaatagcgaacaaggacatgtggggaacagagggttaacctttctgatctccccatcccggatccgggatcgtgaatacagactcaagctcattaccatgacgcaacgttaactattcatgaaaatcgcaaatgaaatgaaataaatatgctagctctcaagcttagccttttgttaacaacactgtcatctcagattttcaaaatatgcttctcaaccattgcaaaacaatcatttgtgtaacagtattgatggctaacgtagcatttagcattagcattcagctggcaacatttacacaaaaaaacagaaaagcattcaaataaaatcatttacctttgaagaacttcagatgttttcaatgaggagactctcagatagcaaatgttcagtttttcctgaaagattatttgtttaggacaaatcgctccgttttctgcgtcacgtttagctatgaaaaaacccctgtatccaggattgtgtaaatctatcagcaagctcattagcataacacaacgttaactatttatgaaaatcgcaaatgaaatgaaataaatatgccatctctcaagcttagccttttgtaaacaacactgtcatctcagattttcaaaatatgcttctcaaccataggaaaacaatcatttgtgtaaaagtagctagctagcgttagcatttagcgttagcatttagcgttagcattagcgttagcatccagcacgcaacattaacaaaaacataaaagccttcaaataaaataatttacctttgaagaacttctgatgttttcaatgaggatactctcagtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU674492 True 843 lncRNA 0.36 2 26968177 27007229

Neighbor

gene id symbol gene type direction distance location
LOC110527590 LOC106575121 coding downstream 382652 26575613 ~ 26585525 (-)
gart gart coding downstream 397098 26547669 ~ 26571079 (-)
LOC110527587 LOC106575119 coding downstream 828228 26096153 ~ 26139949 (-)
LOC110527586 LOC106574337 coding downstream 882547 26060369 ~ 26085630 (-)
adamts1 adamts1 coding downstream 912730 26047765 ~ 26086045 (-)
fam155a fam155a coding upstream 614477 27621706 ~ 27691752 (-)
LOC110527595 lig4 coding upstream 696224 27703453 ~ 27707840 (-)
irs2a irs2 coding upstream 736734 27741604 ~ 27765935 (-)
LOC110527597 rab20 coding upstream 774708 27781937 ~ 27785215 (-)
LOC110527596 cars2 coding upstream 778714 27785943 ~ 27795724 (-)
G591443 NA non-coding downstream 197368 26765871 ~ 26770809 (-)
G591414 NA non-coding downstream 264429 26703514 ~ 26703748 (-)
G591413 NA non-coding downstream 267264 26700691 ~ 26700913 (-)
G591403 NA non-coding downstream 285572 26682281 ~ 26682605 (-)
G591349 NA non-coding downstream 370080 26597833 ~ 26598097 (-)
G591715 NA non-coding upstream 140008 27147237 ~ 27147476 (-)
G591882 NA non-coding upstream 256890 27264119 ~ 27264360 (-)
G592016 NA non-coding upstream 344919 27352148 ~ 27352368 (-)
G592075 NA non-coding upstream 381993 27389222 ~ 27389538 (-)
G592101 NA non-coding upstream 405722 27412951 ~ 27417830 (-)
G590443 NA other downstream 809872 26157993 ~ 26158305 (-)
G589705 NA other downstream 1422759 25544735 ~ 25545418 (-)
LOC110527565 LOC106575142 other downstream 1677572 25215219 ~ 25290844 (-)
G589529 NA other downstream 1689303 25201406 ~ 25278874 (-)
G591808 NA other upstream 158946 27166175 ~ 27166468 (-)
G592298 NA other upstream 475728 27482957 ~ 27483780 (-)
G594636 LOC106593246 other upstream 2017178 29024407 ~ 29026049 (-)
G594762 NA other upstream 2409626 29416855 ~ 29495130 (-)
G594900 NA other upstream 2560972 29568201 ~ 29593462 (-)

Expression


Co-expression Network