G591889


Basic Information

Item Value
gene id G591889
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27268107 ~ 27268322 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU674809
GTATAATAGATCATAAAATTTATCTCCCATAGTGTGCTGCATAAAGCAGGTCGATACACTGCAAATACCCTCCGTTACATTTGATAATGAATAGCAGCAGTCAGTAATCCAATAGATAATGCAGGTCTTCATGCTGCAAAGTAACATTCATATTCTTTACATCCATGAAATGTATGTCATTCTCTCTAGAAAAAACGAATTGGTACTTCAGTTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU674809 True 216 lncRNA 0.35 1 27268107 27268322

Neighbor

gene id symbol gene type direction distance location
LOC118965273 NA coding upstream 672956 26585519 ~ 26595151 (+)
n6amt1 n6amt1 coding upstream 724423 26535783 ~ 26543684 (+)
jam2a LOC106575111 coding upstream 1295709 25956422 ~ 25972398 (+)
mrpl39 LOC106575108 coding upstream 1318787 25939547 ~ 25949320 (+)
LOC110527579 LOC106575110 coding upstream 1333743 25921719 ~ 25934364 (+)
LOC110527592 LOC106575150 coding downstream 190372 27458694 ~ 27482580 (+)
LOC110527593 LOC106575124 coding downstream 237587 27505909 ~ 27555139 (+)
plekha3 LOC106575131 coding downstream 585976 27854006 ~ 27874521 (+)
LOC100653476 LOC106575134 coding downstream 877214 28145536 ~ 28168201 (+)
LOC118965275 LOC106575153 coding downstream 953303 28221625 ~ 28258442 (+)
G591877 NA non-coding upstream 5895 27261939 ~ 27262212 (+)
G591875 NA non-coding upstream 6764 27261130 ~ 27261343 (+)
G591872 NA non-coding upstream 8360 27259466 ~ 27259747 (+)
G591188 NA non-coding upstream 260889 26968078 ~ 27007218 (+)
G591160 NA non-coding upstream 338511 26927728 ~ 26929596 (+)
G592000 NA non-coding downstream 76825 27345147 ~ 27345364 (+)
G592002 NA non-coding downstream 77259 27345581 ~ 27345817 (+)
G592082 NA non-coding downstream 127660 27395982 ~ 27396252 (+)
G592087 NA non-coding downstream 132273 27400595 ~ 27400814 (+)
G592095 NA non-coding downstream 137211 27405533 ~ 27405732 (+)
G590949 LOC106575121 other upstream 690174 26577407 ~ 26577933 (+)
G590936 gart other upstream 714565 26552554 ~ 26553542 (+)
G589933 NA other upstream 1242798 26003930 ~ 26025309 (+)
G589734 NA other upstream 1659501 25587088 ~ 25608606 (+)
G588755 NA other upstream 2362526 24904331 ~ 24905581 (+)
G592134 NA other downstream 214728 27483050 ~ 27483796 (+)
G592445 lig4 other downstream 435261 27703583 ~ 27707294 (+)
G593144 NA other downstream 1566887 28835209 ~ 28841083 (+)
G593171 NA other downstream 1623841 28892163 ~ 28892425 (+)

Expression


Co-expression Network