G592000


Basic Information

Item Value
gene id G592000
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27345147 ~ 27345364 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU674921
ATCCACTTTGAATGAGAATCAATCAGCACAAGGAACATTTTTCCTAGGAAAGGTCCAGCGTAGTCCACATGTAGTCGTGTCCAGGGTTTTTCTGGCCATTCCCATGGATGTAATGGCGCGGTGGGGGGTGACTTCCTGTTACTCTGACAATCTGCACACCGGCTAACCTAATTTTCCACATCGTGGTCCATCTTTGGCCACCAGACATATGACCTTGC

Function

NR:

description
PREDICTED: uncharacterized protein K02A2.6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU674921 True 218 lncRNA 0.49 1 27345147 27345364

Neighbor

gene id symbol gene type direction distance location
LOC118965273 NA coding upstream 749996 26585519 ~ 26595151 (+)
n6amt1 n6amt1 coding upstream 801463 26535783 ~ 26543684 (+)
jam2a LOC106575111 coding upstream 1372749 25956422 ~ 25972398 (+)
mrpl39 LOC106575108 coding upstream 1395827 25939547 ~ 25949320 (+)
LOC110527579 LOC106575110 coding upstream 1410783 25921719 ~ 25934364 (+)
LOC110527592 LOC106575150 coding downstream 113330 27458694 ~ 27482580 (+)
LOC110527593 LOC106575124 coding downstream 160545 27505909 ~ 27555139 (+)
plekha3 LOC106575131 coding downstream 508934 27854006 ~ 27874521 (+)
LOC100653476 LOC106575134 coding downstream 800172 28145536 ~ 28168201 (+)
LOC118965275 LOC106575153 coding downstream 876261 28221625 ~ 28258442 (+)
G591889 NA non-coding upstream 76825 27268107 ~ 27268322 (+)
G591877 NA non-coding upstream 82935 27261939 ~ 27262212 (+)
G591875 NA non-coding upstream 83804 27261130 ~ 27261343 (+)
G591872 NA non-coding upstream 85400 27259466 ~ 27259747 (+)
G591188 NA non-coding upstream 337929 26968078 ~ 27007218 (+)
G592002 NA non-coding downstream 217 27345581 ~ 27345817 (+)
G592082 NA non-coding downstream 50618 27395982 ~ 27396252 (+)
G592087 NA non-coding downstream 55231 27400595 ~ 27400814 (+)
G592095 NA non-coding downstream 60169 27405533 ~ 27405732 (+)
G592111 NA non-coding downstream 84213 27429577 ~ 27429873 (+)
G590949 LOC106575121 other upstream 767214 26577407 ~ 26577933 (+)
G590936 gart other upstream 791605 26552554 ~ 26553542 (+)
G589933 NA other upstream 1319838 26003930 ~ 26025309 (+)
G589734 NA other upstream 1736541 25587088 ~ 25608606 (+)
G588755 NA other upstream 2439566 24904331 ~ 24905581 (+)
G592134 NA other downstream 137686 27483050 ~ 27483796 (+)
G592445 lig4 other downstream 358219 27703583 ~ 27707294 (+)
G593144 NA other downstream 1489845 28835209 ~ 28841083 (+)
G593171 NA other downstream 1546799 28892163 ~ 28892425 (+)

Expression


Co-expression Network