G592082


Basic Information

Item Value
gene id G592082
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27395982 ~ 27396252 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU675003
gggtgtgaggaGGGTGCCATGTGTGTTTTGGTTTTTTTAGGTTTTTTTTGgtttgtctaggtaaatgtaggtctatggtggcctgaatttgttcccaatcagaggcagctgtttatcgttgtctctgattggggatcctatttaggttgccattttccattttggttttgtgggttattgtttatgtgtagttgcatgtctgCACTAGTTGTTTATAGCGGcacgtttgttttgttagtttgtttaagtgttcttcgttaaataaaagaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU675003 True 271 lncRNA 0.39 1 27395982 27396252

Neighbor

gene id symbol gene type direction distance location
LOC118965273 NA coding upstream 800831 26585519 ~ 26595151 (+)
n6amt1 n6amt1 coding upstream 852298 26535783 ~ 26543684 (+)
jam2a LOC106575111 coding upstream 1423584 25956422 ~ 25972398 (+)
mrpl39 LOC106575108 coding upstream 1446662 25939547 ~ 25949320 (+)
LOC110527579 LOC106575110 coding upstream 1461618 25921719 ~ 25934364 (+)
LOC110527592 LOC106575150 coding downstream 62442 27458694 ~ 27482580 (+)
LOC110527593 LOC106575124 coding downstream 109657 27505909 ~ 27555139 (+)
plekha3 LOC106575131 coding downstream 458046 27854006 ~ 27874521 (+)
LOC100653476 LOC106575134 coding downstream 749284 28145536 ~ 28168201 (+)
LOC118965275 LOC106575153 coding downstream 825373 28221625 ~ 28258442 (+)
G592002 NA non-coding upstream 50165 27345581 ~ 27345817 (+)
G592000 NA non-coding upstream 50618 27345147 ~ 27345364 (+)
G591889 NA non-coding upstream 127660 27268107 ~ 27268322 (+)
G591877 NA non-coding upstream 133770 27261939 ~ 27262212 (+)
G591875 NA non-coding upstream 134639 27261130 ~ 27261343 (+)
G592087 NA non-coding downstream 4343 27400595 ~ 27400814 (+)
G592095 NA non-coding downstream 9281 27405533 ~ 27405732 (+)
G592111 NA non-coding downstream 33325 27429577 ~ 27429873 (+)
G592127 NA non-coding downstream 50457 27446709 ~ 27448084 (+)
G592128 NA non-coding downstream 54745 27450997 ~ 27451257 (+)
G590949 LOC106575121 other upstream 818049 26577407 ~ 26577933 (+)
G590936 gart other upstream 842440 26552554 ~ 26553542 (+)
G589933 NA other upstream 1370673 26003930 ~ 26025309 (+)
G589734 NA other upstream 1787376 25587088 ~ 25608606 (+)
G588755 NA other upstream 2490401 24904331 ~ 24905581 (+)
G592134 NA other downstream 86798 27483050 ~ 27483796 (+)
G592445 lig4 other downstream 307331 27703583 ~ 27707294 (+)
G593144 NA other downstream 1438957 28835209 ~ 28841083 (+)
G593171 NA other downstream 1495911 28892163 ~ 28892425 (+)

Expression


Co-expression Network