G592087


Basic Information

Item Value
gene id G592087
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27400595 ~ 27400814 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU675008
CACATAGATATATCGATATAGTTCAAGATTTAGTAAAGGGGTACAACAACAGCTACCATAAGAGTATACGTATGAAACCCTCCGAGGTCTCTTCTGAAAACTCTTTTGAAGTCTTTAAAATCTGTATGGTTTGTTCCCCCTTCGCCgtaagaaaatacattttaaattcatagTGGGGGACTTGGTGCGTTGAGGGGTGTTTTCGACAAAAAATATGAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU675008 True 220 lncRNA 0.38 1 27400595 27400814

Neighbor

gene id symbol gene type direction distance location
LOC118965273 NA coding upstream 805444 26585519 ~ 26595151 (+)
n6amt1 n6amt1 coding upstream 856911 26535783 ~ 26543684 (+)
jam2a LOC106575111 coding upstream 1428197 25956422 ~ 25972398 (+)
mrpl39 LOC106575108 coding upstream 1451275 25939547 ~ 25949320 (+)
LOC110527579 LOC106575110 coding upstream 1466231 25921719 ~ 25934364 (+)
LOC110527592 LOC106575150 coding downstream 57880 27458694 ~ 27482580 (+)
LOC110527593 LOC106575124 coding downstream 105095 27505909 ~ 27555139 (+)
plekha3 LOC106575131 coding downstream 453484 27854006 ~ 27874521 (+)
LOC100653476 LOC106575134 coding downstream 744722 28145536 ~ 28168201 (+)
LOC118965275 LOC106575153 coding downstream 820811 28221625 ~ 28258442 (+)
G592082 NA non-coding upstream 4343 27395982 ~ 27396252 (+)
G592002 NA non-coding upstream 54778 27345581 ~ 27345817 (+)
G592000 NA non-coding upstream 55231 27345147 ~ 27345364 (+)
G591889 NA non-coding upstream 132273 27268107 ~ 27268322 (+)
G591877 NA non-coding upstream 138383 27261939 ~ 27262212 (+)
G592095 NA non-coding downstream 4719 27405533 ~ 27405732 (+)
G592111 NA non-coding downstream 28763 27429577 ~ 27429873 (+)
G592127 NA non-coding downstream 45895 27446709 ~ 27448084 (+)
G592128 NA non-coding downstream 50183 27450997 ~ 27451257 (+)
G592130 NA non-coding downstream 53978 27454792 ~ 27455043 (+)
G590949 LOC106575121 other upstream 822662 26577407 ~ 26577933 (+)
G590936 gart other upstream 847053 26552554 ~ 26553542 (+)
G589933 NA other upstream 1375286 26003930 ~ 26025309 (+)
G589734 NA other upstream 1791989 25587088 ~ 25608606 (+)
G588755 NA other upstream 2495014 24904331 ~ 24905581 (+)
G592134 NA other downstream 82236 27483050 ~ 27483796 (+)
G592445 lig4 other downstream 302769 27703583 ~ 27707294 (+)
G593144 NA other downstream 1434395 28835209 ~ 28841083 (+)
G593171 NA other downstream 1491349 28892163 ~ 28892425 (+)

Expression


Co-expression Network