G592282


Basic Information

Item Value
gene id G592282
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27446675 ~ 27447332 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU675206
agaggatcaaggctctgaggggtgatcagtcctcttctggctatgccggtagagattataagagtacatggtcaTTAAGGCTAGACGTCATACTCCTTCCACCTTCCACTGCGCTAGCCAGCAACTTTAATAATTACACACACATCCATTTAGTCCTGTTAGCCTAGTCCCTGAAAACAAGTTTTGAATTCAATTTACATCTCAACCTTACGCCTGGCTGTCCCTAATTACTGCAGCTAATTGTTGACTACTTTCCCTTACTTGATGTGGCCCTGTAGTCACCACCAACCACTATGGTTGTTTAAAAGAGACTACATAGTACATCATAGAATAGGGGGGCGCAACATACACATGGTGGCAAAACATACAGAAGGCCGCTGGTTCAAATCCTGCTGTTGCTCTTTTgttttctaaccttaaccctaactctaaacttCACCTGAAACTGTTTGGTCTCAAGAGTTCTGGTCTTGGCTTCGTCTCTGATATGACCTATAGTTGAGGAAGTTTTTGTAGCATCTCATGCGAGTAGACATCGCCATGTTtatataaataaatgaaataaaggAGAATGTCAAATATGTGCTCCAGTTGACACAAACATAAGACAATTAATTTGCACAGTGAATCAATaagttaaaaataaagaaattcaGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU675206 True 658 lncRNA 0.41 1 27446675 27447332

Neighbor

gene id symbol gene type direction distance location
LOC110527591 LOC106575122 coding downstream 304034 26729638 ~ 27142641 (-)
LOC110527590 LOC106575121 coding downstream 861150 26575613 ~ 26585525 (-)
gart gart coding downstream 875596 26547669 ~ 26571079 (-)
LOC110527587 LOC106575119 coding downstream 1306726 26096153 ~ 26139949 (-)
LOC110527586 LOC106574337 coding downstream 1361045 26060369 ~ 26085630 (-)
fam155a fam155a coding upstream 174374 27621706 ~ 27691752 (-)
LOC110527595 lig4 coding upstream 256121 27703453 ~ 27707840 (-)
irs2a irs2 coding upstream 296631 27741604 ~ 27765935 (-)
LOC110527597 rab20 coding upstream 334605 27781937 ~ 27785215 (-)
LOC110527596 cars2 coding upstream 338611 27785943 ~ 27795724 (-)
G592101 NA non-coding downstream 28845 27412951 ~ 27417830 (-)
G592075 NA non-coding downstream 57137 27389222 ~ 27389538 (-)
G592016 NA non-coding downstream 94307 27352148 ~ 27352368 (-)
G591882 NA non-coding downstream 182315 27264119 ~ 27264360 (-)
G591715 NA non-coding downstream 299199 27147237 ~ 27147476 (-)
G592289 NA non-coding upstream 10192 27457524 ~ 27457742 (-)
G592290 NA non-coding upstream 10480 27457812 ~ 27458040 (-)
G592281 NA non-coding upstream 11897 27459229 ~ 27477519 (-)
G592299 NA non-coding upstream 37197 27484529 ~ 27486136 (-)
G592300 NA non-coding upstream 42922 27490254 ~ 27490482 (-)
G591808 NA other downstream 280207 27166175 ~ 27166468 (-)
G590443 NA other downstream 1288370 26157993 ~ 26158305 (-)
G589705 NA other downstream 1901257 25544735 ~ 25545418 (-)
LOC110527565 LOC106575142 other downstream 2156070 25215219 ~ 25290844 (-)
G592298 NA other upstream 35625 27482957 ~ 27483780 (-)
G594636 LOC106593246 other upstream 1577075 29024407 ~ 29026049 (-)
G594762 NA other upstream 1969523 29416855 ~ 29495130 (-)
G594900 NA other upstream 2120869 29568201 ~ 29593462 (-)
G594905 NA other upstream 2142661 29589993 ~ 29625899 (-)

Expression


Co-expression Network