G592127


Basic Information

Item Value
gene id G592127
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27446709 ~ 27448084 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU675049
CTGTGCAAATTAATTGTCTTATGTTTGTGTCAACTGGAGCACATATTTGACATTCTcctttatttcatttatttatataAACATGGCGATGTCTACTCGCATGAGATGCTACAAAAACTTCCTCAACTATAGGTCATATCAGAGACGAAGCCAAGACCAGAACTCTTGAGACCAAACAGTTTCAGGTGaagtttagagttagggttaaggttagaaaacAAAAGAGCAACAGCAGGATTTGAACCAGCGGCCTTCTGTATGTTTTGCCACCATGTGTATGTTGCGCCCCCCTATTCTATGATGTACTATGTAGTCTCTTTTAAACAACCATAGTGGTTGGTGGTGACTACAGGGCCACATCAAGTAAGGGAAAGTAGTCAACAATTAGCTGCAGTAATTAGGGACAGCCAGGCGTAAGGTTGAGATGTAAATTGAATTCAAAACTTGTTTTCAGGGACTAGGCTAACAGGACTAAATGGATGTGTGTGTAATTATTAAAGTTGCTGGCTAGCGCAGTGGAAGGTGGAAGGAGTATGACGTCTAGCCTTAAtgaccatgtactcttataatctctaccggcatagccagaagaggactgatcacccctcagagccttgatcctctctagatttcttcatAGGTacctgcctttctaaggagtttcctagccaccgtgcttctacatctacattgcttgctctttggggttttaagctgggtttatGTAGAAAGCAggttgtgacatctgctgatgtaaaaagggcttcataaatacatttgattgatttgaaatttgacatGACAGGAGTACTCTTAGAGTCATGACAGAAAATGGCTCTCAGGTTGTTATTAAACATATACACCCCTGTACATTCCAAAGACAATGCTGACTATTATACAAATGGGAACATAAGCAACTtttacagaccatcccctggcatggcgcagtactatattagcacactacccatCTGTTAAGAGGGAGGGTGTTAGCAATGGGTGGAAACTGAGTGAGCCAATGTCAACCTCTACAAGTCTGGAACAATAATGGTCCAGGGAAAccacaaacagtttcagctggactttcacataATCAAAGAGAGAGAGTTTATCCTGTTGAGCTGTCTTGAGAAAGATAACCCCACACCGAAATCAGAGGTAGGTAGCcttgtttgtgggtagttgtttcctgttttgtgttttcacctttcaggactctttcgattttcatttcttacatacactttgttattttgtattttcgtgtTCTGGTATAATAAATGATCATGGACACTTaacacgctgcgttttggtctgaACCTTCCTTCTCCTCATCCGATGAAGACGAAGATCGTTacagtgggatatgcgtcaac

Function

NR:

description
PREDICTED: uncharacterized protein LOC109098287

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU675049 True 1376 lncRNA 0.41 1 27446709 27448084

Neighbor

gene id symbol gene type direction distance location
LOC118965273 NA coding upstream 851558 26585519 ~ 26595151 (+)
n6amt1 n6amt1 coding upstream 903025 26535783 ~ 26543684 (+)
jam2a LOC106575111 coding upstream 1474311 25956422 ~ 25972398 (+)
mrpl39 LOC106575108 coding upstream 1497389 25939547 ~ 25949320 (+)
LOC110527579 LOC106575110 coding upstream 1512345 25921719 ~ 25934364 (+)
LOC110527592 LOC106575150 coding downstream 10610 27458694 ~ 27482580 (+)
LOC110527593 LOC106575124 coding downstream 57825 27505909 ~ 27555139 (+)
plekha3 LOC106575131 coding downstream 406214 27854006 ~ 27874521 (+)
LOC100653476 LOC106575134 coding downstream 697452 28145536 ~ 28168201 (+)
LOC118965275 LOC106575153 coding downstream 773541 28221625 ~ 28258442 (+)
G592111 NA non-coding upstream 16836 27429577 ~ 27429873 (+)
G592095 NA non-coding upstream 40977 27405533 ~ 27405732 (+)
G592087 NA non-coding upstream 45895 27400595 ~ 27400814 (+)
G592082 NA non-coding upstream 50457 27395982 ~ 27396252 (+)
G592002 NA non-coding upstream 100892 27345581 ~ 27345817 (+)
G592128 NA non-coding downstream 2913 27450997 ~ 27451257 (+)
G592130 NA non-coding downstream 6708 27454792 ~ 27455043 (+)
G592132 NA non-coding downstream 9923 27458007 ~ 27458271 (+)
G592135 NA non-coding downstream 36951 27485035 ~ 27485772 (+)
G592146 NA non-coding downstream 39470 27487554 ~ 27487859 (+)
G590949 LOC106575121 other upstream 868776 26577407 ~ 26577933 (+)
G590936 gart other upstream 893167 26552554 ~ 26553542 (+)
G589933 NA other upstream 1421400 26003930 ~ 26025309 (+)
G589734 NA other upstream 1838103 25587088 ~ 25608606 (+)
G588755 NA other upstream 2541128 24904331 ~ 24905581 (+)
G592134 NA other downstream 34966 27483050 ~ 27483796 (+)
G592445 lig4 other downstream 255499 27703583 ~ 27707294 (+)
G593144 NA other downstream 1387125 28835209 ~ 28841083 (+)
G593171 NA other downstream 1444079 28892163 ~ 28892425 (+)

Expression


Co-expression Network