G592148


Basic Information

Item Value
gene id G592148
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27489753 ~ 27490212 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU675070
gtcGGCGAAAACCTGAagcaaatccaaccaggaagtgcctaaGAAAAACGaatctccctgttccattgcatgccttccctccatttaaagggatatcaaccagattcctttccctatggcttccacatggtgtgaacagtctttagacatagtttcagtcttttattctgaaaaatgagcgagtcCGATCACATCGCGTCTGTGGATGGCTGGGTGCAAGCAGAATTTTACATGcacaacagcttggagcagacattttctctctctctcctattgaaaaagctatggtccagttgaaatattatcaattatttattgtaaaaacaacctgaggattgattatgaaaaacgtttgacatgtttctacgaactttacggatactatttggaattttcatctgcccgtcatgacctgcacgagcctgtggatttctgaacaaagtgtgccaaccaaatggag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU675070 True 460 lncRNA 0.42 1 27489753 27490212

Neighbor

gene id symbol gene type direction distance location
LOC110527592 LOC106575150 coding upstream 7173 27458694 ~ 27482580 (+)
LOC118965273 NA coding upstream 894602 26585519 ~ 26595151 (+)
n6amt1 n6amt1 coding upstream 946069 26535783 ~ 26543684 (+)
jam2a LOC106575111 coding upstream 1517355 25956422 ~ 25972398 (+)
mrpl39 LOC106575108 coding upstream 1540433 25939547 ~ 25949320 (+)
LOC110527593 LOC106575124 coding downstream 15697 27505909 ~ 27555139 (+)
plekha3 LOC106575131 coding downstream 364086 27854006 ~ 27874521 (+)
LOC100653476 LOC106575134 coding downstream 655324 28145536 ~ 28168201 (+)
LOC118965275 LOC106575153 coding downstream 731413 28221625 ~ 28258442 (+)
LOC110527602 LOC105007064 coding downstream 816055 28306267 ~ 28368030 (+)
G592146 NA non-coding upstream 1894 27487554 ~ 27487859 (+)
G592135 NA non-coding upstream 3981 27485035 ~ 27485772 (+)
G592132 NA non-coding upstream 31482 27458007 ~ 27458271 (+)
G592130 NA non-coding upstream 34710 27454792 ~ 27455043 (+)
G592128 NA non-coding upstream 38496 27450997 ~ 27451257 (+)
G592149 NA non-coding downstream 42 27490254 ~ 27490620 (+)
G592162 NA non-coding downstream 13294 27503506 ~ 27503717 (+)
G592168 NA non-coding downstream 67647 27557859 ~ 27558133 (+)
G592167 NA non-coding downstream 71375 27561587 ~ 27562135 (+)
G592134 NA other upstream 5957 27483050 ~ 27483796 (+)
G590949 LOC106575121 other upstream 911820 26577407 ~ 26577933 (+)
G590936 gart other upstream 936211 26552554 ~ 26553542 (+)
G589933 NA other upstream 1464444 26003930 ~ 26025309 (+)
G589734 NA other upstream 1881147 25587088 ~ 25608606 (+)
G592445 lig4 other downstream 213371 27703583 ~ 27707294 (+)
G593144 NA other downstream 1344997 28835209 ~ 28841083 (+)
G593171 NA other downstream 1401951 28892163 ~ 28892425 (+)
G593283 NA other downstream 1569486 29059698 ~ 29064592 (+)

Expression


Co-expression Network