G592162


Basic Information

Item Value
gene id G592162
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27503506 ~ 27503717 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU675085
ggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttccacagtgctccttgggatgttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggaccagcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU675085 True 212 lncRNA 0.46 1 27503506 27503717

Neighbor

gene id symbol gene type direction distance location
LOC110527592 LOC106575150 coding upstream 20926 27458694 ~ 27482580 (+)
LOC118965273 NA coding upstream 908355 26585519 ~ 26595151 (+)
n6amt1 n6amt1 coding upstream 959822 26535783 ~ 26543684 (+)
jam2a LOC106575111 coding upstream 1531108 25956422 ~ 25972398 (+)
mrpl39 LOC106575108 coding upstream 1554186 25939547 ~ 25949320 (+)
LOC110527593 LOC106575124 coding downstream 2192 27505909 ~ 27555139 (+)
plekha3 LOC106575131 coding downstream 350581 27854006 ~ 27874521 (+)
LOC100653476 LOC106575134 coding downstream 641819 28145536 ~ 28168201 (+)
LOC118965275 LOC106575153 coding downstream 717908 28221625 ~ 28258442 (+)
LOC110527602 LOC105007064 coding downstream 802550 28306267 ~ 28368030 (+)
G592149 NA non-coding upstream 12886 27490254 ~ 27490620 (+)
G592148 NA non-coding upstream 13294 27489753 ~ 27490212 (+)
G592146 NA non-coding upstream 15647 27487554 ~ 27487859 (+)
G592135 NA non-coding upstream 17734 27485035 ~ 27485772 (+)
G592132 NA non-coding upstream 45235 27458007 ~ 27458271 (+)
G592168 NA non-coding downstream 54142 27557859 ~ 27558133 (+)
G592167 NA non-coding downstream 57870 27561587 ~ 27562135 (+)
G592211 NA non-coding downstream 61663 27565380 ~ 27565585 (+)
G592218 NA non-coding downstream 69979 27573696 ~ 27573899 (+)
G592134 NA other upstream 19710 27483050 ~ 27483796 (+)
G590949 LOC106575121 other upstream 925573 26577407 ~ 26577933 (+)
G590936 gart other upstream 949964 26552554 ~ 26553542 (+)
G589933 NA other upstream 1478197 26003930 ~ 26025309 (+)
G589734 NA other upstream 1894900 25587088 ~ 25608606 (+)
G592445 lig4 other downstream 199866 27703583 ~ 27707294 (+)
G593144 NA other downstream 1331492 28835209 ~ 28841083 (+)
G593171 NA other downstream 1388446 28892163 ~ 28892425 (+)
G593283 NA other downstream 1555981 29059698 ~ 29064592 (+)

Expression


Co-expression Network