G592218


Basic Information

Item Value
gene id G592218
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27573696 ~ 27573899 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU675141
gtcccATACTGACTCAGGACAGGCAatggtcgagagccatgtgtcttCCGAAAAACAACcttgccaagctgcactgcttcttgacacactgctcacttaacccggaagacagccacaccaatgtgtcagaggaaacaccatacaactggcgaccgtgtcagcatgcatgcgcccagtccgccacaggagttgctaaaGCACGAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU675141 True 204 lncRNA 0.53 1 27573696 27573899

Neighbor

gene id symbol gene type direction distance location
LOC110527593 LOC106575124 coding upstream 18941 27505909 ~ 27555139 (+)
LOC110527592 LOC106575150 coding upstream 91116 27458694 ~ 27482580 (+)
LOC118965273 NA coding upstream 978545 26585519 ~ 26595151 (+)
n6amt1 n6amt1 coding upstream 1030012 26535783 ~ 26543684 (+)
jam2a LOC106575111 coding upstream 1601298 25956422 ~ 25972398 (+)
plekha3 LOC106575131 coding downstream 280399 27854006 ~ 27874521 (+)
LOC100653476 LOC106575134 coding downstream 571637 28145536 ~ 28168201 (+)
LOC118965275 LOC106575153 coding downstream 647726 28221625 ~ 28258442 (+)
LOC110527602 LOC105007064 coding downstream 732368 28306267 ~ 28368030 (+)
mtx2 mtx2 coding downstream 1092517 28666416 ~ 28686793 (+)
G592211 NA non-coding upstream 8111 27565380 ~ 27565585 (+)
G592167 NA non-coding upstream 11561 27561587 ~ 27562135 (+)
G592168 NA non-coding upstream 15563 27557859 ~ 27558133 (+)
G592162 NA non-coding upstream 69979 27503506 ~ 27503717 (+)
G592220 NA non-coding downstream 3264 27577163 ~ 27577468 (+)
G592264 NA non-coding downstream 93655 27667554 ~ 27667770 (+)
G592278 NA non-coding downstream 117705 27691604 ~ 27691689 (+)
G592432 NA non-coding downstream 123747 27697646 ~ 27697944 (+)
G592438 NA non-coding downstream 125178 27699077 ~ 27699421 (+)
G592134 NA other upstream 89900 27483050 ~ 27483796 (+)
G590949 LOC106575121 other upstream 995763 26577407 ~ 26577933 (+)
G590936 gart other upstream 1020154 26552554 ~ 26553542 (+)
G589933 NA other upstream 1548387 26003930 ~ 26025309 (+)
G589734 NA other upstream 1965090 25587088 ~ 25608606 (+)
G592445 lig4 other downstream 129684 27703583 ~ 27707294 (+)
G593144 NA other downstream 1261310 28835209 ~ 28841083 (+)
G593171 NA other downstream 1318264 28892163 ~ 28892425 (+)
G593283 NA other downstream 1485799 29059698 ~ 29064592 (+)

Expression


Co-expression Network