G592220


Basic Information

Item Value
gene id G592220
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27577163 ~ 27577468 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU675143
ctctctgtgttagtgatggctgttaaacagtctgatggccttgagatagaagctgtttttcagtctctgctttgatgcacctttactgacctcgccttctggatggtagcggggtgaacaagcagtggctcgggtggttgttgtccttgatgatctttttggccttcctgtgaaatcgggtgctgtaggtgtcctgggggacaggtagtttgcccctggtgatgcgttttgcagaccgcaccaccctctggagagccctgtcgctgtgggcggtgcagttgccataccaggcagtgatacaacctg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU675143 True 306 lncRNA 0.54 1 27577163 27577468

Neighbor

gene id symbol gene type direction distance location
LOC110527593 LOC106575124 coding upstream 22408 27505909 ~ 27555139 (+)
LOC110527592 LOC106575150 coding upstream 94583 27458694 ~ 27482580 (+)
LOC118965273 NA coding upstream 982012 26585519 ~ 26595151 (+)
n6amt1 n6amt1 coding upstream 1033479 26535783 ~ 26543684 (+)
jam2a LOC106575111 coding upstream 1604765 25956422 ~ 25972398 (+)
plekha3 LOC106575131 coding downstream 276830 27854006 ~ 27874521 (+)
LOC100653476 LOC106575134 coding downstream 568068 28145536 ~ 28168201 (+)
LOC118965275 LOC106575153 coding downstream 644157 28221625 ~ 28258442 (+)
LOC110527602 LOC105007064 coding downstream 728799 28306267 ~ 28368030 (+)
mtx2 mtx2 coding downstream 1088948 28666416 ~ 28686793 (+)
G592218 NA non-coding upstream 3264 27573696 ~ 27573899 (+)
G592211 NA non-coding upstream 11578 27565380 ~ 27565585 (+)
G592167 NA non-coding upstream 15028 27561587 ~ 27562135 (+)
G592168 NA non-coding upstream 19030 27557859 ~ 27558133 (+)
G592264 NA non-coding downstream 90086 27667554 ~ 27667770 (+)
G592278 NA non-coding downstream 114136 27691604 ~ 27691689 (+)
G592432 NA non-coding downstream 120178 27697646 ~ 27697944 (+)
G592438 NA non-coding downstream 121609 27699077 ~ 27699421 (+)
G592444 NA non-coding downstream 125018 27702486 ~ 27702807 (+)
G592134 NA other upstream 93367 27483050 ~ 27483796 (+)
G590949 LOC106575121 other upstream 999230 26577407 ~ 26577933 (+)
G590936 gart other upstream 1023621 26552554 ~ 26553542 (+)
G589933 NA other upstream 1551854 26003930 ~ 26025309 (+)
G589734 NA other upstream 1968557 25587088 ~ 25608606 (+)
G592445 lig4 other downstream 126115 27703583 ~ 27707294 (+)
G593144 NA other downstream 1257741 28835209 ~ 28841083 (+)
G593171 NA other downstream 1314695 28892163 ~ 28892425 (+)
G593283 NA other downstream 1482230 29059698 ~ 29064592 (+)

Expression


Co-expression Network