G592278


Basic Information

Item Value
gene id G592278
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27691604 ~ 27691689 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU675201
CAAAGTGCCAGAGATGTTGTCTTTTGATGTCCACTGTCATCTCGGTCCTGGGTTAGTTGTCGCCATCGTGTTCTTCTTGGAACACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU675201 True 86 lncRNA 0.48 1 27691604 27691689

Neighbor

gene id symbol gene type direction distance location
LOC110527593 LOC106575124 coding upstream 136849 27505909 ~ 27555139 (+)
LOC110527592 LOC106575150 coding upstream 209024 27458694 ~ 27482580 (+)
LOC118965273 NA coding upstream 1096453 26585519 ~ 26595151 (+)
n6amt1 n6amt1 coding upstream 1147920 26535783 ~ 26543684 (+)
jam2a LOC106575111 coding upstream 1719206 25956422 ~ 25972398 (+)
plekha3 LOC106575131 coding downstream 162609 27854006 ~ 27874521 (+)
LOC100653476 LOC106575134 coding downstream 453847 28145536 ~ 28168201 (+)
LOC118965275 LOC106575153 coding downstream 529936 28221625 ~ 28258442 (+)
LOC110527602 LOC105007064 coding downstream 614578 28306267 ~ 28368030 (+)
mtx2 mtx2 coding downstream 974727 28666416 ~ 28686793 (+)
G592264 NA non-coding upstream 23834 27667554 ~ 27667770 (+)
G592220 NA non-coding upstream 114136 27577163 ~ 27577468 (+)
G592218 NA non-coding upstream 117705 27573696 ~ 27573899 (+)
G592211 NA non-coding upstream 126019 27565380 ~ 27565585 (+)
G592167 NA non-coding upstream 129469 27561587 ~ 27562135 (+)
G592432 NA non-coding downstream 5957 27697646 ~ 27697944 (+)
G592438 NA non-coding downstream 7388 27699077 ~ 27699421 (+)
G592444 NA non-coding downstream 10797 27702486 ~ 27702807 (+)
G592447 NA non-coding downstream 20964 27712653 ~ 27712787 (+)
G592472 NA non-coding downstream 34215 27725904 ~ 27726181 (+)
G592134 NA other upstream 207808 27483050 ~ 27483796 (+)
G590949 LOC106575121 other upstream 1113671 26577407 ~ 26577933 (+)
G590936 gart other upstream 1138062 26552554 ~ 26553542 (+)
G589933 NA other upstream 1666295 26003930 ~ 26025309 (+)
G589734 NA other upstream 2082998 25587088 ~ 25608606 (+)
G592445 lig4 other downstream 11894 27703583 ~ 27707294 (+)
G593144 NA other downstream 1143520 28835209 ~ 28841083 (+)
G593171 NA other downstream 1200474 28892163 ~ 28892425 (+)
G593283 NA other downstream 1368009 29059698 ~ 29064592 (+)

Expression


Co-expression Network