G592457



Basic Information


Item Value
gene id G592457
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27712529 ~ 27712809 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU675388
ATAGTTAGCTAACAGCTACTACTTCCTGTTTTGACTTCTTCTGTGGTCACAAAAAGCTGATAGTCTGGCTCTAGTGTAGTGACTACTTATTTACTACCAAGATGTCAAAATCTATACCCGAttactactgaaaacactactgttttcctactgaacactacaaaactctacttgtgtttcttgAGTAGTGCATAAACTACACGTTCACTACGTAGTCACTTCTGCTCAAATAGGTTTTTGTGTAGTAATTCACCAGTATTTTTCATGAGtggggtctatag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU675388 True 281 lncRNA 0.37 1 27712529 27712809

Neighbor


gene id symbol gene type direction distance location
LOC110527595 lig4 coding downstream 4689 27703453 ~ 27707840 (-)
fam155a fam155a coding downstream 20777 27621706 ~ 27691752 (-)
LOC110527591 LOC106575122 coding downstream 569888 26729638 ~ 27142641 (-)
LOC110527590 LOC106575121 coding downstream 1127004 26575613 ~ 26585525 (-)
gart gart coding downstream 1141450 26547669 ~ 26571079 (-)
irs2a irs2 coding upstream 31154 27741604 ~ 27765935 (-)
LOC110527597 rab20 coding upstream 69128 27781937 ~ 27785215 (-)
LOC110527596 cars2 coding upstream 73134 27785943 ~ 27795724 (-)
ankrd10a ankrd10 coding upstream 89268 27802077 ~ 27853519 (-)
LOC110527600 LOC106575132 coding upstream 177597 27890406 ~ 28034304 (-)
G592456 NA non-coding downstream 129 27712075 ~ 27712400 (-)
G592455 NA non-coding downstream 515 27711686 ~ 27712014 (-)
G592454 NA non-coding downstream 1095 27711227 ~ 27711434 (-)
G592427 NA non-coding downstream 18597 27693725 ~ 27693932 (-)
G592413 NA non-coding downstream 29614 27682708 ~ 27682915 (-)
G592458 NA non-coding upstream 94 27712903 ~ 27713203 (-)
G593896 NA non-coding upstream 21803 27734612 ~ 27735007 (-)
G593970 NA non-coding upstream 158556 27871365 ~ 27874514 (-)
G593982 NA non-coding upstream 174494 27887303 ~ 27888964 (-)
G592298 NA other downstream 228749 27482957 ~ 27483780 (-)
G591808 NA other downstream 546061 27166175 ~ 27166468 (-)
G590443 NA other downstream 1554224 26157993 ~ 26158305 (-)
G589705 NA other downstream 2167111 25544735 ~ 25545418 (-)
G594636 LOC106593246 other upstream 1311598 29024407 ~ 29026049 (-)
G594762 NA other upstream 1704046 29416855 ~ 29495130 (-)
G594900 NA other upstream 1855392 29568201 ~ 29593462 (-)
G594905 NA other upstream 1877184 29589993 ~ 29625899 (-)
G594906 NA other upstream 1886822 29599631 ~ 29612736 (-)

Expression



Co-expression Network