Gene
RNA
| Item | Value |
|---|---|
| gene id | G592458 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 27712903 ~ 27713203 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: aspartate aminotransferase, cytoplasmic-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU675389 | True | 301 | lncRNA | 0.44 | 1 | 27712903 | 27713203 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527595 | lig4 | coding | downstream | 5063 | 27703453 ~ 27707840 (-) |
| fam155a | fam155a | coding | downstream | 21151 | 27621706 ~ 27691752 (-) |
| LOC110527591 | LOC106575122 | coding | downstream | 570262 | 26729638 ~ 27142641 (-) |
| LOC110527590 | LOC106575121 | coding | downstream | 1127378 | 26575613 ~ 26585525 (-) |
| gart | gart | coding | downstream | 1141824 | 26547669 ~ 26571079 (-) |
| irs2a | irs2 | coding | upstream | 30760 | 27741604 ~ 27765935 (-) |
| LOC110527597 | rab20 | coding | upstream | 68734 | 27781937 ~ 27785215 (-) |
| LOC110527596 | cars2 | coding | upstream | 72740 | 27785943 ~ 27795724 (-) |
| ankrd10a | ankrd10 | coding | upstream | 88874 | 27802077 ~ 27853519 (-) |
| LOC110527600 | LOC106575132 | coding | upstream | 177203 | 27890406 ~ 28034304 (-) |
| G592457 | NA | non-coding | downstream | 94 | 27712529 ~ 27712809 (-) |
| G592456 | NA | non-coding | downstream | 503 | 27712075 ~ 27712400 (-) |
| G592455 | NA | non-coding | downstream | 889 | 27711686 ~ 27712014 (-) |
| G592454 | NA | non-coding | downstream | 1469 | 27711227 ~ 27711434 (-) |
| G592427 | NA | non-coding | downstream | 18971 | 27693725 ~ 27693932 (-) |
| G593896 | NA | non-coding | upstream | 21409 | 27734612 ~ 27735007 (-) |
| G593970 | NA | non-coding | upstream | 158162 | 27871365 ~ 27874514 (-) |
| G593982 | NA | non-coding | upstream | 174100 | 27887303 ~ 27888964 (-) |
| G592298 | NA | other | downstream | 229123 | 27482957 ~ 27483780 (-) |
| G591808 | NA | other | downstream | 546435 | 27166175 ~ 27166468 (-) |
| G590443 | NA | other | downstream | 1554598 | 26157993 ~ 26158305 (-) |
| G589705 | NA | other | downstream | 2167485 | 25544735 ~ 25545418 (-) |
| G594636 | LOC106593246 | other | upstream | 1311204 | 29024407 ~ 29026049 (-) |
| G594762 | NA | other | upstream | 1703652 | 29416855 ~ 29495130 (-) |
| G594900 | NA | other | upstream | 1854998 | 29568201 ~ 29593462 (-) |
| G594905 | NA | other | upstream | 1876790 | 29589993 ~ 29625899 (-) |
| G594906 | NA | other | upstream | 1886428 | 29599631 ~ 29612736 (-) |
