G593970


Basic Information

Item Value
gene id G593970
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27871365 ~ 27874514 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU677068
ACTTCCTTTTTAAGACACATCTTTACATTTCAAACATACAGTCACATAACTCCTTCCATGCCCAGAATCTCTGTTAAGGCATTACTCTTTTTTGGTGGATGTAATGAATGGCAAAcataactttaaaaaaataacaataaaaagtGTCTGTCACATAGCAATATGGTGAACACTGGGGGCGTGCCAAATTTGAAATATTGGGCAAGTTTGTTTTGCATCTCCCAGTGACTTGGGAGGGTGGAGATTTCACTGTAGGACCAATGGAATCGTCTAAAATAGACAAAACTTTGCCCATCCGGGGTACCAGGAGATGCATGTGAACTCAGCCCATTGATGAAAATGTACCCACATCCACACATTCTGAATTGGTCCTTGGCACAGTTAGCAACCCTAACGTTTAAGGGTTTTGGTTAAAGGCTAATATGTCCCTCCTCTGTGTTTCAAGGACAATTTTTCACTCCATAGTGAATGAACAGTAATGTTGCATATCAAACATTTTATTCTGCAATAATAACATAAAACTTCCTGGAATAGTACAAACATTCAAAAAGGACTTTGTTTTGATCCATAATTCTTAAAGTGCAAAGCAATGCTTCCACAGGAAAAAATACAATACTTTTTGAAAATACCATTAACGCATTGCCAAGCAGTGACTGCATTGCAGTATGTGAGCAATAAAAGCTGGGGAGTGTTCATTAGGCACTGAAGGGAAGAAAATGACAGGGAAGGACAACTAGAGTTGTTCAATAAGAAAcactcatttttttttttttgttttaaaacttttttccattgcgtgccctaatgaacacaaccttaGTAACACCTCACATTACAGTAGCCTCAGATCAGTCTAACTTCAGTAGAGTAACTGAAGTACCTGATACATTCAGCTATTCACGCTTTAGCCAAGTTATTATTCAGAAAAGATAGACAGTACTATGCCTACAAGTTTGCACAGGCCTACTGACCAGACGGACCAGTCACTTGACAGCAGACGACCAATCTCAACTCCAGGACCTggattcacaaaacacttctaAAGTCTCTTTATCTGAAGATACTGCAATGTATTTGGTGAGTGACAGGACAGGTCAGATGGACAGGTCAGTATCTGGAGTGTCTGACATAGCTCGGGGACTGGTAGGACTGATGGCACCACACTCCTCAGGGATACTGTGGGAGGAGTCCCCGTTCACACTGGCATTGAGACACAGCACAGCAGTGCCTCTTACGGTCCATCTCGTAAACACAGCTGTCACTGTGAGCCTCTGTGTCCGAACAAGTCCGTGTCCTCCTCTGGGTTGACCTTTGACCTGATAACACACCCTCCTTTGGCGGGAGA

Function

NR:

description
pleckstrin homology domain-containing family A member 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU677068 True 1345 lncRNA 0.42 2 27871365 27874514

Neighbor

gene id symbol gene type direction distance location
ankrd10a ankrd10 coding downstream 17846 27802077 ~ 27853519 (-)
LOC110527596 cars2 coding downstream 75641 27785943 ~ 27795724 (-)
LOC110527597 rab20 coding downstream 86150 27781937 ~ 27785215 (-)
irs2a irs2 coding downstream 105430 27741604 ~ 27765935 (-)
LOC110527595 lig4 coding downstream 163525 27703453 ~ 27707840 (-)
LOC110527600 LOC106575132 coding upstream 15892 27890406 ~ 28034304 (-)
LOC110527106 LOC106575135 coding upstream 301519 28176033 ~ 28177839 (-)
LOC110527603 LOC106575136 coding upstream 425193 28299707 ~ 28306319 (-)
LOC110527604 LOC100196534 coding upstream 706674 28581188 ~ 28615643 (-)
atp5mc3b atp5g3 coding upstream 742614 28617128 ~ 28619938 (-)
G593896 NA non-coding downstream 136358 27734612 ~ 27735007 (-)
G592458 NA non-coding downstream 158162 27712903 ~ 27713203 (-)
G592457 NA non-coding downstream 158556 27712529 ~ 27712809 (-)
G592456 NA non-coding downstream 158965 27712075 ~ 27712400 (-)
G593982 NA non-coding upstream 12789 27887303 ~ 27888964 (-)
G593987 NA non-coding upstream 19781 27894295 ~ 27894508 (-)
G593988 NA non-coding upstream 20954 27895468 ~ 27895771 (-)
G593994 NA non-coding upstream 32968 27907482 ~ 27907688 (-)
G592298 NA other downstream 387585 27482957 ~ 27483780 (-)
G591808 NA other downstream 704897 27166175 ~ 27166468 (-)
LOC110527590 LOC106575121 other downstream 1285858 26575613 ~ 26585525 (-)
G590443 NA other downstream 1713060 26157993 ~ 26158305 (-)
G589705 NA other downstream 2325947 25544735 ~ 25545418 (-)
G594636 LOC106593246 other upstream 1149893 29024407 ~ 29026049 (-)
G594762 NA other upstream 1542341 29416855 ~ 29495130 (-)
G594900 NA other upstream 1693687 29568201 ~ 29593462 (-)
G594905 NA other upstream 1715479 29589993 ~ 29625899 (-)
G594906 NA other upstream 1725117 29599631 ~ 29612736 (-)

Expression


Co-expression Network