G593982


Basic Information

Item Value
gene id G593982
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27887303 ~ 27888964 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU677087
gaaaataagaatttgttcttacctgacttgcctagttaaataaaggtcaaataaaaaaaatacaaatatgtcctaacctacttgccaaaactatagtttcttaacaagaattttgtggagtggttaaaaaaagagttttaatgactccaacataagtgtatgtgaagtaagtattcaaccccctgagtcaaaacatgctagaatcaactttggcagcaattacagctttgagtctttctgggtaatgctctaagagctttgcacacctggattgtacaatttttgcacattattatttaaaaaaatgttcaagctctgtcaagttgattgttggtTATTGCTCGACAGCCATTTTCCAGTATTTTTAAGTCATAACTGAAACTAGGCCAATTagtaacattcaatgtcgtcttggtaagcaactacagtgtatatttggccttttgttttaggtttttgtcctgctgaaTGGCGAATTttttcccagtgtctgttggaaagcagactgaaccaggttttcctctagaattttgcctgtgcttagctctattccatttatttgtatcctaaaaactccctagtccttgctgatgacaagcataccaataGCATCATTCAGCCACCACTTTGCTTGAATATATGGAGAGTgacactcagtgatgtgttttatggatttgccccaaacgtaatgctttgtattcaggacaaaaagttgaTGTCTTTGCCAAAATGTTTGCaggtttactttagtgccttattgtaaaAAGCtctgaaaacataattccactttgacattatggggtattgtacgtaggccagtgacacatttaatacattttaaattctggctgtaacacaaaaaaatgtggaaaaagtcaaggggtgtgaataatttcttAAGGCACTGTGCCTCTATGGGTCCACAGTGGGATTTGTAATATGGTGTGTTAACCAGAATTTACAAAGTTCTCCTAAAAGAATTGGTACCATACATGGGTATTTCTAGAATATTAAGTCATTTACACTGCTCAGATGAGACAACAGAGGTTTGTGAGGATGTGGGGACTTGATAAGTGTATAAGATGTATGTATGAGAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU677087 True 1099 lncRNA 0.36 2 27887303 27888964

Neighbor

gene id symbol gene type direction distance location
ankrd10a ankrd10 coding downstream 33784 27802077 ~ 27853519 (-)
LOC110527596 cars2 coding downstream 91579 27785943 ~ 27795724 (-)
LOC110527597 rab20 coding downstream 102088 27781937 ~ 27785215 (-)
irs2a irs2 coding downstream 121368 27741604 ~ 27765935 (-)
LOC110527595 lig4 coding downstream 179463 27703453 ~ 27707840 (-)
LOC110527600 LOC106575132 coding upstream 1442 27890406 ~ 28034304 (-)
LOC110527106 LOC106575135 coding upstream 287069 28176033 ~ 28177839 (-)
LOC110527603 LOC106575136 coding upstream 410743 28299707 ~ 28306319 (-)
LOC110527604 LOC100196534 coding upstream 692224 28581188 ~ 28615643 (-)
atp5mc3b atp5g3 coding upstream 728164 28617128 ~ 28619938 (-)
G593970 NA non-coding downstream 12789 27871365 ~ 27874514 (-)
G593896 NA non-coding downstream 152296 27734612 ~ 27735007 (-)
G592458 NA non-coding downstream 174100 27712903 ~ 27713203 (-)
G592457 NA non-coding downstream 174494 27712529 ~ 27712809 (-)
G593987 NA non-coding upstream 5331 27894295 ~ 27894508 (-)
G593988 NA non-coding upstream 6504 27895468 ~ 27895771 (-)
G593994 NA non-coding upstream 18518 27907482 ~ 27907688 (-)
G593998 NA non-coding upstream 23721 27912685 ~ 27912899 (-)
G592298 NA other downstream 403523 27482957 ~ 27483780 (-)
G591808 NA other downstream 720835 27166175 ~ 27166468 (-)
LOC110527590 LOC106575121 other downstream 1301796 26575613 ~ 26585525 (-)
G590443 NA other downstream 1728998 26157993 ~ 26158305 (-)
G589705 NA other downstream 2341885 25544735 ~ 25545418 (-)
G594636 LOC106593246 other upstream 1135443 29024407 ~ 29026049 (-)
G594762 NA other upstream 1527891 29416855 ~ 29495130 (-)
G594900 NA other upstream 1679237 29568201 ~ 29593462 (-)
G594905 NA other upstream 1701029 29589993 ~ 29625899 (-)
G594906 NA other upstream 1710667 29599631 ~ 29612736 (-)

Expression


Co-expression Network