G592567


Basic Information

Item Value
gene id G592567
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27887312 ~ 27889004 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU675514
ACATACATCTTATACACTTATCAAGTCCCCACATCCTCACAAACCTCTGTTGTCTCATCTGAGCAGTGTAAATGACTTAATATTCTAGAAATACCCATGTATGGTACCAATTCTTTTAGGAGAACTTTGTAAATTCTGGTTAACACACCATATTACAAATCCCACTGTGGACCCATAGAGGCACAGTGCCTTaagaaattattcacaccccttgactttttccacatttttttgtgttacagccagaatttaaaatgtattaaatgtgtcactggcctacgtacaataccccataatgtcaaagtggaattatgttttcagaGCTTtttacaataaggcactaaagtaaacctGCAAACATTTTGGCAAAGACAtcaactttttgtcctgaatacaaagcattacgtttggggcaaatccataaaacacatcactgagtgtcACTCTCCATATATTCAAGCAAAGTGGTGGCTGAATGATGCtattggtatgcttgtcatcagcaaggactagggagtttttaggatacaaataaatggaatagagctaagcacaggcaaaattctagaggaaaacctggttcagtctgctttccaacagacactgggaaaaAATTCGCCAttcagcaggacaaaaacctaaaacaaaaggccaaatatacactgtagttgcttaccaagacgacattgaatgttactAATTGGCCTAGTTTCAGTTATGACTTAAAAATACTGGAAAATGGCTGTCGAGCAATAacccagggggttgaatacttacttcacatacacttatgttggagtcattaaaactctttttttaaccactccacaaaattcttgttaagaaactatagttttggcaagtaggttaggacatatttgtattttttttatttgacctttatttaactaggcaagtcaggtaagaacaaattcttattttcaatgacggcctaggaacagtgggttaactgccttgttcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU675514 True 983 lncRNA 0.37 3 27887312 27889004

Neighbor

gene id symbol gene type direction distance location
plekha3 LOC106575131 coding upstream 12791 27854006 ~ 27874521 (+)
LOC110527593 LOC106575124 coding upstream 332557 27505909 ~ 27555139 (+)
LOC110527592 LOC106575150 coding upstream 404732 27458694 ~ 27482580 (+)
LOC118965273 NA coding upstream 1292161 26585519 ~ 26595151 (+)
n6amt1 n6amt1 coding upstream 1343628 26535783 ~ 26543684 (+)
LOC100653476 LOC106575134 coding downstream 256532 28145536 ~ 28168201 (+)
LOC118965275 LOC106575153 coding downstream 332621 28221625 ~ 28258442 (+)
LOC110527602 LOC105007064 coding downstream 417263 28306267 ~ 28368030 (+)
mtx2 mtx2 coding downstream 777412 28666416 ~ 28686793 (+)
LOC110527611 rbm45 coding downstream 865472 28754476 ~ 28780185 (+)
G592485 NA non-coding upstream 142479 27741017 ~ 27744833 (+)
G592481 LOC100846954 non-coding upstream 152527 27734446 ~ 27734785 (+)
G592472 NA non-coding upstream 161131 27725904 ~ 27726181 (+)
G592447 NA non-coding upstream 174525 27712653 ~ 27712787 (+)
G592444 NA non-coding upstream 184505 27702486 ~ 27702807 (+)
G592582 LOC106575132 non-coding downstream 6039 27895043 ~ 27895354 (+)
G592583 NA non-coding downstream 7776 27896780 ~ 27897444 (+)
G592589 NA non-coding downstream 14276 27903280 ~ 27903509 (+)
G592590 NA non-coding downstream 17199 27906203 ~ 27906471 (+)
G592598 NA non-coding downstream 26140 27915144 ~ 27915463 (+)
G592445 lig4 other upstream 180018 27703583 ~ 27707294 (+)
G592134 NA other upstream 403516 27483050 ~ 27483796 (+)
G590949 LOC106575121 other upstream 1309379 26577407 ~ 26577933 (+)
G590936 gart other upstream 1333770 26552554 ~ 26553542 (+)
G593144 NA other downstream 946205 28835209 ~ 28841083 (+)
G593171 NA other downstream 1003159 28892163 ~ 28892425 (+)
G593283 NA other downstream 1170694 29059698 ~ 29064592 (+)
LOC110527619 LOC106578599 other downstream 1440668 29329584 ~ 29503787 (+)
G593513 LOC106610831 other downstream 1639023 29528027 ~ 29528910 (+)

Expression


Co-expression Network