G592582 (LOC106575132)


Basic Information

Item Value
gene id G592582
gene name LOC106575132
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27895043 ~ 27895354 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU675529
TTGTGGGCGTCAAGCTGGGAGAGGGAGTTGACGGCCACTTTACATAACGAACAGTAGAGAAGCTTCTTGGCCTTCTCCTCCTCTGATTCGTCGGAGTGCTTGCACGGGGCGGGGGCAGCAGGCACAGCAGGCACAGCAGGCACTGGGGTTGGTTTAGTGAGGGTGGGCTTTGACATCTCTGGGGCCGGACTGGCAGGTGTGGGCTCACACAGAGGTTTACACAGGATAGATGAGGGCGCTAATGCCAGGCCAGCAGCTGGGAAAAACGATTTTGAAGACGCCATGGGGTAGAGATTGTTTGGATGTAACCCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU675529 True 312 lncRNA 0.56 1 27895043 27895354

Neighbor

gene id symbol gene type direction distance location
plekha3 LOC106575131 coding upstream 20522 27854006 ~ 27874521 (+)
LOC110527593 LOC106575124 coding upstream 340288 27505909 ~ 27555139 (+)
LOC110527592 LOC106575150 coding upstream 412463 27458694 ~ 27482580 (+)
LOC118965273 NA coding upstream 1299892 26585519 ~ 26595151 (+)
n6amt1 n6amt1 coding upstream 1351359 26535783 ~ 26543684 (+)
LOC100653476 LOC106575134 coding downstream 250182 28145536 ~ 28168201 (+)
LOC118965275 LOC106575153 coding downstream 326271 28221625 ~ 28258442 (+)
LOC110527602 LOC105007064 coding downstream 410913 28306267 ~ 28368030 (+)
mtx2 mtx2 coding downstream 771062 28666416 ~ 28686793 (+)
LOC110527611 rbm45 coding downstream 859122 28754476 ~ 28780185 (+)
G592568 NA non-coding upstream 2910 27850749 ~ 27892133 (+)
G592567 NA non-coding upstream 6039 27887312 ~ 27889004 (+)
G592485 NA non-coding upstream 150210 27741017 ~ 27744833 (+)
G592481 LOC100846954 non-coding upstream 160258 27734446 ~ 27734785 (+)
G592472 NA non-coding upstream 168862 27725904 ~ 27726181 (+)
G592583 NA non-coding downstream 1426 27896780 ~ 27897444 (+)
G592589 NA non-coding downstream 7926 27903280 ~ 27903509 (+)
G592590 NA non-coding downstream 10849 27906203 ~ 27906471 (+)
G592598 NA non-coding downstream 19790 27915144 ~ 27915463 (+)
G592599 NA non-coding downstream 20268 27915622 ~ 27915824 (+)
G592445 lig4 other upstream 187749 27703583 ~ 27707294 (+)
G592134 NA other upstream 411247 27483050 ~ 27483796 (+)
G590949 LOC106575121 other upstream 1317110 26577407 ~ 26577933 (+)
G590936 gart other upstream 1341501 26552554 ~ 26553542 (+)
G593144 NA other downstream 939855 28835209 ~ 28841083 (+)
G593171 NA other downstream 996809 28892163 ~ 28892425 (+)
G593283 NA other downstream 1164344 29059698 ~ 29064592 (+)
LOC110527619 LOC106578599 other downstream 1434318 29329584 ~ 29503787 (+)
G593513 LOC106610831 other downstream 1632673 29528027 ~ 29528910 (+)

Expression


Co-expression Network