G592589


Basic Information

Item Value
gene id G592589
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27903280 ~ 27903509 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU675536
acctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatccacAATGggatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaacttctgttcacaaattgtctccatccaacctcactgagctcgagctgttttgcaaggaggaatgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU675536 True 230 lncRNA 0.42 1 27903280 27903509

Neighbor

gene id symbol gene type direction distance location
plekha3 LOC106575131 coding upstream 28759 27854006 ~ 27874521 (+)
LOC110527593 LOC106575124 coding upstream 348525 27505909 ~ 27555139 (+)
LOC110527592 LOC106575150 coding upstream 420700 27458694 ~ 27482580 (+)
LOC118965273 NA coding upstream 1308129 26585519 ~ 26595151 (+)
n6amt1 n6amt1 coding upstream 1359596 26535783 ~ 26543684 (+)
LOC100653476 LOC106575134 coding downstream 242027 28145536 ~ 28168201 (+)
LOC118965275 LOC106575153 coding downstream 318116 28221625 ~ 28258442 (+)
LOC110527602 LOC105007064 coding downstream 402758 28306267 ~ 28368030 (+)
mtx2 mtx2 coding downstream 762907 28666416 ~ 28686793 (+)
LOC110527611 rbm45 coding downstream 850967 28754476 ~ 28780185 (+)
G592583 NA non-coding upstream 5836 27896780 ~ 27897444 (+)
G592582 LOC106575132 non-coding upstream 7926 27895043 ~ 27895354 (+)
G592568 NA non-coding upstream 11147 27850749 ~ 27892133 (+)
G592567 NA non-coding upstream 14276 27887312 ~ 27889004 (+)
G592485 NA non-coding upstream 158447 27741017 ~ 27744833 (+)
G592590 NA non-coding downstream 2694 27906203 ~ 27906471 (+)
G592598 NA non-coding downstream 11635 27915144 ~ 27915463 (+)
G592599 NA non-coding downstream 12113 27915622 ~ 27915824 (+)
G592601 NA non-coding downstream 13257 27916766 ~ 27916991 (+)
G592606 NA non-coding downstream 18710 27922219 ~ 27922452 (+)
G592445 lig4 other upstream 195986 27703583 ~ 27707294 (+)
G592134 NA other upstream 419484 27483050 ~ 27483796 (+)
G590949 LOC106575121 other upstream 1325347 26577407 ~ 26577933 (+)
G590936 gart other upstream 1349738 26552554 ~ 26553542 (+)
G593144 NA other downstream 931700 28835209 ~ 28841083 (+)
G593171 NA other downstream 988654 28892163 ~ 28892425 (+)
G593283 NA other downstream 1156189 29059698 ~ 29064592 (+)
LOC110527619 LOC106578599 other downstream 1426163 29329584 ~ 29503787 (+)
G593513 LOC106610831 other downstream 1624518 29528027 ~ 29528910 (+)

Expression


Co-expression Network