G592606


Basic Information

Item Value
gene id G592606
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27922219 ~ 27922452 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU675553
CTTTATAGGTCAAGATCATTACTTTATAAGGAACTGCCTGTTAAATATGTTTACGTATGAAATCCGTTCTTCAGTATTAGACTTTGTCCTTCAGCACAACAAAAGTTTAATGTAATACCACAACGTCACTATTATGCTGAATGACAGTAGCTTTGTTTTTCCATGTTTTCACTAGTTTACAACAGTTAATCATGCAATTCATATTTACTTGTTGTATGAATACTGAATAATATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU675553 True 234 lncRNA 0.31 1 27922219 27922452

Neighbor

gene id symbol gene type direction distance location
plekha3 LOC106575131 coding upstream 47698 27854006 ~ 27874521 (+)
LOC110527593 LOC106575124 coding upstream 367464 27505909 ~ 27555139 (+)
LOC110527592 LOC106575150 coding upstream 439639 27458694 ~ 27482580 (+)
LOC118965273 NA coding upstream 1327068 26585519 ~ 26595151 (+)
n6amt1 n6amt1 coding upstream 1378535 26535783 ~ 26543684 (+)
LOC100653476 LOC106575134 coding downstream 223084 28145536 ~ 28168201 (+)
LOC118965275 LOC106575153 coding downstream 299173 28221625 ~ 28258442 (+)
LOC110527602 LOC105007064 coding downstream 383815 28306267 ~ 28368030 (+)
mtx2 mtx2 coding downstream 743964 28666416 ~ 28686793 (+)
LOC110527611 rbm45 coding downstream 832024 28754476 ~ 28780185 (+)
G592601 NA non-coding upstream 5228 27916766 ~ 27916991 (+)
G592599 NA non-coding upstream 6395 27915622 ~ 27915824 (+)
G592598 NA non-coding upstream 6756 27915144 ~ 27915463 (+)
G592590 NA non-coding upstream 15748 27906203 ~ 27906471 (+)
G592589 NA non-coding upstream 18710 27903280 ~ 27903509 (+)
G592621 NA non-coding downstream 26651 27949103 ~ 27949381 (+)
G592684 NA non-coding downstream 100451 28022903 ~ 28138362 (+)
G592746 NA non-coding downstream 198538 28120990 ~ 28123682 (+)
G592699 NA non-coding downstream 247094 28169546 ~ 28172955 (+)
G592990 NA non-coding downstream 632278 28554730 ~ 28555209 (+)
G592445 lig4 other upstream 214925 27703583 ~ 27707294 (+)
G592134 NA other upstream 438423 27483050 ~ 27483796 (+)
G590949 LOC106575121 other upstream 1344286 26577407 ~ 26577933 (+)
G590936 gart other upstream 1368677 26552554 ~ 26553542 (+)
G593144 NA other downstream 912757 28835209 ~ 28841083 (+)
G593171 NA other downstream 969711 28892163 ~ 28892425 (+)
G593283 NA other downstream 1137246 29059698 ~ 29064592 (+)
LOC110527619 LOC106578599 other downstream 1407220 29329584 ~ 29503787 (+)
G593513 LOC106610831 other downstream 1605575 29528027 ~ 29528910 (+)

Expression


Co-expression Network