Gene
RNA
| Item | Value |
|---|---|
| gene id | G594016 |
| gene name | LOC106601697 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 27943458 ~ 27943717 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110511904 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU677123 | True | 260 | lncRNA | 0.43 | 1 | 27943458 | 27943717 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ankrd10a | ankrd10 | coding | downstream | 89939 | 27802077 ~ 27853519 (-) |
| LOC110527596 | cars2 | coding | downstream | 147734 | 27785943 ~ 27795724 (-) |
| LOC110527597 | rab20 | coding | downstream | 158243 | 27781937 ~ 27785215 (-) |
| irs2a | irs2 | coding | downstream | 177523 | 27741604 ~ 27765935 (-) |
| LOC110527595 | lig4 | coding | downstream | 235618 | 27703453 ~ 27707840 (-) |
| LOC110527106 | LOC106575135 | coding | upstream | 232316 | 28176033 ~ 28177839 (-) |
| LOC110527603 | LOC106575136 | coding | upstream | 355990 | 28299707 ~ 28306319 (-) |
| LOC110527604 | LOC100196534 | coding | upstream | 637471 | 28581188 ~ 28615643 (-) |
| atp5mc3b | atp5g3 | coding | upstream | 673411 | 28617128 ~ 28619938 (-) |
| lnpk | lnpb | coding | upstream | 683672 | 28627389 ~ 28647053 (-) |
| G593998 | NA | non-coding | downstream | 30559 | 27912685 ~ 27912899 (-) |
| G593994 | NA | non-coding | downstream | 35770 | 27907482 ~ 27907688 (-) |
| G593988 | NA | non-coding | downstream | 47687 | 27895468 ~ 27895771 (-) |
| LOC110527600 | LOC106575132 | non-coding | downstream | 48543 | 27890406 ~ 28034304 (-) |
| G593987 | NA | non-coding | downstream | 48950 | 27894295 ~ 27894508 (-) |
| G594018 | NA | non-coding | upstream | 2034 | 27945751 ~ 27946203 (-) |
| G594026 | NA | non-coding | upstream | 10614 | 27954331 ~ 27954556 (-) |
| G594138 | NA | non-coding | upstream | 177286 | 28121003 ~ 28123732 (-) |
| G594126 | NA | non-coding | upstream | 224632 | 28168349 ~ 28173047 (-) |
| G594207 | NA | non-coding | upstream | 323024 | 28266741 ~ 28290556 (-) |
| G592298 | NA | other | downstream | 459678 | 27482957 ~ 27483780 (-) |
| G591808 | NA | other | downstream | 776990 | 27166175 ~ 27166468 (-) |
| LOC110527590 | LOC106575121 | other | downstream | 1357951 | 26575613 ~ 26585525 (-) |
| G590443 | NA | other | downstream | 1785153 | 26157993 ~ 26158305 (-) |
| G589705 | NA | other | downstream | 2398040 | 25544735 ~ 25545418 (-) |
| G594636 | LOC106593246 | other | upstream | 1080690 | 29024407 ~ 29026049 (-) |
| G594762 | NA | other | upstream | 1473138 | 29416855 ~ 29495130 (-) |
| G594900 | NA | other | upstream | 1624484 | 29568201 ~ 29593462 (-) |
| G594905 | NA | other | upstream | 1646276 | 29589993 ~ 29625899 (-) |
| G594906 | NA | other | upstream | 1655914 | 29599631 ~ 29612736 (-) |
