Gene
RNA
| Item | Value |
|---|---|
| gene id | G592746 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 28120990 ~ 28123682 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU675711 | False | 315 | lncRNA | 0.42 | 2 | 28120990 | 28123682 |
| TU675712 | False | 307 | lncRNA | 0.42 | 2 | 28120990 | 28123682 |
| TU675713 | True | 315 | lncRNA | 0.42 | 2 | 28120990 | 28123682 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| plekha3 | LOC106575131 | coding | upstream | 246469 | 27854006 ~ 27874521 (+) |
| LOC110527593 | LOC106575124 | coding | upstream | 566235 | 27505909 ~ 27555139 (+) |
| LOC110527592 | LOC106575150 | coding | upstream | 638410 | 27458694 ~ 27482580 (+) |
| LOC118965273 | NA | coding | upstream | 1525839 | 26585519 ~ 26595151 (+) |
| n6amt1 | n6amt1 | coding | upstream | 1577306 | 26535783 ~ 26543684 (+) |
| LOC100653476 | LOC106575134 | coding | downstream | 21854 | 28145536 ~ 28168201 (+) |
| LOC118965275 | LOC106575153 | coding | downstream | 97943 | 28221625 ~ 28258442 (+) |
| LOC110527602 | LOC105007064 | coding | downstream | 182585 | 28306267 ~ 28368030 (+) |
| mtx2 | mtx2 | coding | downstream | 542734 | 28666416 ~ 28686793 (+) |
| LOC110527611 | rbm45 | coding | downstream | 630794 | 28754476 ~ 28780185 (+) |
| G592621 | NA | non-coding | upstream | 171609 | 27949103 ~ 27949381 (+) |
| G592606 | NA | non-coding | upstream | 198538 | 27922219 ~ 27922452 (+) |
| G592601 | NA | non-coding | upstream | 203999 | 27916766 ~ 27916991 (+) |
| G592599 | NA | non-coding | upstream | 205166 | 27915622 ~ 27915824 (+) |
| G592598 | NA | non-coding | upstream | 205527 | 27915144 ~ 27915463 (+) |
| G592699 | NA | non-coding | downstream | 45864 | 28169546 ~ 28172955 (+) |
| G592990 | NA | non-coding | downstream | 431048 | 28554730 ~ 28555209 (+) |
| G592993 | NA | non-coding | downstream | 435003 | 28558685 ~ 28559022 (+) |
| G593005 | NA | non-coding | downstream | 443148 | 28566830 ~ 28567405 (+) |
| G593006 | NA | non-coding | downstream | 444416 | 28568098 ~ 28578328 (+) |
| G592445 | lig4 | other | upstream | 413696 | 27703583 ~ 27707294 (+) |
| G592134 | NA | other | upstream | 637194 | 27483050 ~ 27483796 (+) |
| G590949 | LOC106575121 | other | upstream | 1543057 | 26577407 ~ 26577933 (+) |
| G590936 | gart | other | upstream | 1567448 | 26552554 ~ 26553542 (+) |
| G593144 | NA | other | downstream | 711527 | 28835209 ~ 28841083 (+) |
| G593171 | NA | other | downstream | 768481 | 28892163 ~ 28892425 (+) |
| G593283 | NA | other | downstream | 936016 | 29059698 ~ 29064592 (+) |
| LOC110527619 | LOC106578599 | other | downstream | 1205990 | 29329584 ~ 29503787 (+) |
| G593513 | LOC106610831 | other | downstream | 1404345 | 29528027 ~ 29528910 (+) |
