Gene
RNA
| Item | Value |
|---|---|
| gene id | G594138 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 28121003 ~ 28123732 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU677249 | False | 352 | lncRNA | 0.42 | 2 | 28121003 | 28123732 |
| TU677250 | False | 344 | lncRNA | 0.43 | 2 | 28121003 | 28123732 |
| TU677251 | True | 352 | lncRNA | 0.42 | 2 | 28121003 | 28123732 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527600 | LOC106575132 | coding | downstream | 86699 | 27890406 ~ 28034304 (-) |
| ankrd10a | ankrd10 | coding | downstream | 267484 | 27802077 ~ 27853519 (-) |
| LOC110527596 | cars2 | coding | downstream | 325279 | 27785943 ~ 27795724 (-) |
| LOC110527597 | rab20 | coding | downstream | 335788 | 27781937 ~ 27785215 (-) |
| irs2a | irs2 | coding | downstream | 355068 | 27741604 ~ 27765935 (-) |
| LOC110527106 | LOC106575135 | coding | upstream | 52301 | 28176033 ~ 28177839 (-) |
| LOC110527603 | LOC106575136 | coding | upstream | 175975 | 28299707 ~ 28306319 (-) |
| LOC110527604 | LOC100196534 | coding | upstream | 457456 | 28581188 ~ 28615643 (-) |
| atp5mc3b | atp5g3 | coding | upstream | 493396 | 28617128 ~ 28619938 (-) |
| lnpk | lnpb | coding | upstream | 503657 | 28627389 ~ 28647053 (-) |
| G594026 | NA | non-coding | downstream | 166447 | 27954331 ~ 27954556 (-) |
| G594018 | NA | non-coding | downstream | 174800 | 27945751 ~ 27946203 (-) |
| G594016 | LOC106601697 | non-coding | downstream | 177286 | 27943458 ~ 27943717 (-) |
| G593998 | NA | non-coding | downstream | 208104 | 27912685 ~ 27912899 (-) |
| G593994 | NA | non-coding | downstream | 213315 | 27907482 ~ 27907688 (-) |
| G594126 | NA | non-coding | upstream | 44617 | 28168349 ~ 28173047 (-) |
| G594207 | NA | non-coding | upstream | 143009 | 28266741 ~ 28290556 (-) |
| G594251 | LOC105007064 | non-coding | upstream | 231673 | 28355405 ~ 28356279 (-) |
| G594243 | NA | non-coding | upstream | 243429 | 28367161 ~ 28370155 (-) |
| G594394 | NA | non-coding | upstream | 415218 | 28538950 ~ 28539207 (-) |
| G592298 | NA | other | downstream | 637223 | 27482957 ~ 27483780 (-) |
| G591808 | NA | other | downstream | 954535 | 27166175 ~ 27166468 (-) |
| LOC110527590 | LOC106575121 | other | downstream | 1535496 | 26575613 ~ 26585525 (-) |
| G590443 | NA | other | downstream | 1962698 | 26157993 ~ 26158305 (-) |
| G589705 | NA | other | downstream | 2575585 | 25544735 ~ 25545418 (-) |
| G594636 | LOC106593246 | other | upstream | 900675 | 29024407 ~ 29026049 (-) |
| G594762 | NA | other | upstream | 1293123 | 29416855 ~ 29495130 (-) |
| G594900 | NA | other | upstream | 1444469 | 29568201 ~ 29593462 (-) |
| G594905 | NA | other | upstream | 1466261 | 29589993 ~ 29625899 (-) |
| G594906 | NA | other | upstream | 1475899 | 29599631 ~ 29612736 (-) |
