G594126


Basic Information

Item Value
gene id G594126
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 28168349 ~ 28173047 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU677235
gttgtattctgtgcatgtgacaaataacatttgatttgaaataacatCAGGGTCACAgctgttgaaggaagtggaccaaggtgcagcgtggtgtgcatacattttctctttatttggaAAAGACGCAGAacaagaacaaaaacaacaaacactacacaaaaaaaaatgtgaagCTAAAGGCTGAGGCTAAACAAAAGTCAACTTCCCAAAAAGACAGGTGgaaaaaaaggctacctaacaacgctagacagctgtccctgattgagaaccctacccggccaaaacatagaaatacaaataatagaatatagaatacccaccccaactcacaccctgaccaaaccaaaataaagacataaacaggatctctaaggtcagggcgtgacaatcagACTTTGGGAATACAAACACACTGCTTGGACATTTCAGTAAGAAGATATTTAATGATCAACATTCATAATGGATGGCAATGAAAATGTTTCTTAAATGAAATGATGATTATAGTACAGATGACACCTGTAGTATGTGGGTTAATTTTGGGTCAAGTATGGTACTGGTGAGGCATGTATGGTGTTAACCAATGCCACCATATAGCGCCTTGAAGAGTTGCAAATGCATTCAAACCAGTGGTTTCTAGAATAAGCACTTTCCTTACTTGAAATCAGTTCAACTTCAGGTAATTGGTAACATCCTAAAGACAAGTACCATTTAGTGGAAGTGACAAACAGAGGTCGTGCATTTCCAAAATAACTGAGGGTGTCAACCTGTCTTTTTAAAAGTTAAGAAAATAAAACATACCACATTTCAGTGCAATAGAGTGCTGAGGTGTGCCGGTGTCATTTTGTAGTACACAAAGCAAAGAAGTGATTTGCTGCCATTTGCCCCCATCCATTTTCCCACAAGATAGATTTTTTATAGCGATAAAAAGGTCTGTGTAAGACTTAGGCCAACTAATTACAATGTGTTTTTTTAACCAAATTAATATCTTTAAGAGGTTTTTAGTCTTTATTTTTAGTCAAAGATTGATTGACATCACCTCAGAACAATAGCTAGTCAGTACACCTACATGCTACACAGACCTTATTGTAGCTATCTAAAATAATCACTGTGAAAACATCGGTGAAATTTGATTAGAACCAGGCAGTCAGACTCGGCCTACAAAATGACAACACCTTGTCTCCCTGTACAGGAATAACTAATCATTTACAGCATggtacaatgttttttttttttacaaaaacaatACTGCAATTTAGATGGCATGTAGTCTATTGAAATTTAGAATAACATTTGAGACATTTCAAAAACTTGAGTTGCATAGAAAACATCATTGCCTTTCAAAAGCTGAGCATTTTTCTAGTTCCTATATCAAATTTTGTTTGCTTTTGTTCATGTAGGTTAATCTCAAGATGTCTCTTGTCAATATAAAGTGCATTTTGTAATTTCCCTCTGAATTCCTATAAATCCACATAACAAAATAATATTTTAAGTGTGTCTATTTGCCAGTTTTTCTCCTACGActtcattattattataatatttaactaggcaagtcagctaagaacacattcttatttacagtgacggcctaccagggaacagtgggttaatggcagatttttaccttgtaggTTTGGGGATTCAAtcctgcaacctttcagttacttgcgcaccgatctaaccactaggctgcctgccacccccaatacagtggcttgtgaaagtattcaccccgctTAGCATTTATCCTATTCTGTTGCCTTACACCCTGTAATTAAAATAGATTCTTCAgggatttgtatcatttgatttacacaacatgcctaccactttgaagatgcaaaatatgatcctacttgagacgcagacgtctcaactaggcacctggaaatgcaaatgcgctacgctaaatgctaaatgtactcgttaaaactcaaacgttcattaaaacacacatgcagggtatcgaattaaagctacactcgttgtgaatctagccaacaagtcagatttttaaaatgcttttcggcgaaagcatgagaagctattatctgatagcatgcaacaccccaatatacctgaaggggacgtaaacaaaatagcgtagccggcgctacacaaaacgcagaaataaaatataaaacattcattacctttgatgatattctttgttggcactcctatatgttccataaacatcacaattgggtcttttttccgattaaatccgtccatgtatgcccaaaatatccatttgtatagcctgtctggttcaggaaaaaagctctcttccaacacgcaacgtcatttttaaaaattatataagttgcctatattctttgacaaaacacttcaacctacttttgtaacccaactttaggtatttgtaaacgtgaataagcgatcaaattgatcactgggcgatctgtattcaatagcagctactcaagaaaacaatgtccctttttctcttttccaaaatcgattgctgtatgctggacggaatgaaggatctatttgtcatgacacaaaggatttttgtcaatgaaaatgacgtttttggctatatcgtgtggaagctgtaggaattgcaatctcggtcctatttaatttggtgccccttaaacaatacatgcaagtggcgcatggatatttttttcagttttcagtgaccagtttttatagcgcttttcgatgaaacacacgctctgttatagtcacagccgtgatttaaccagttttaaaAACTCATTTTtgtgttacttacaacctcatgcttatcgcattagcctacgttagctcaaccgtcccgtggaagggacactgatctcgacaaagttaatggtgctccgtgggatgttcaaagattccgatattttttataacccaaccctgatctgtacttctccacaaatgtgcccctgacctgtttggagagctccttggtattCATAGTgcagcttgcttggtggtgccccttgcttagtggtgttgcagactctggggcctttcagaacaggtgtgtatgtactgagatcatatgacacttagattgcacacaggtggactttttttaactaattatgtgacttctgaaagtaattggttgcaccagatcttatttaggggcttcataacaaagtgggtgaatacatacagtggggagaacaagtatttgatacatcagaaaagcagaacttaattttggtacagaaacctttgtttgcaattacagagatcatacatttcctatagttcttgaccaggtttgcacacactgcagcagggatattggcccactcctccatacagaccttctccagatccttcaggtttcggggctgtcgctgggcaatatggacttttagctccctccaaatatgttctattgggttcaggtctggagactggctaggccactccaggaccttgagatgcttcttacggagacactccttagttgccctggctgtgtgtttcgggtcgttgtcatgctggaagacccagccacgacccatcttcaatgctcttactgagtgAAGGagattgttggccaagatcttgcgatacatggccacatccatcctccccttaatacggtgcagtcgtcctgtcccctttgcagaaaagcatccccaaagaatgatgtttccacctccatacttcacggttgggatggtgttcttggggttgtactcatccttcttcttcctgcaaacacggcaagtggagtttagaccaaaaagctcaatttttgtctcatcagaccacatgaccttctcccattcctcctctggatcatccagatggtcattggcaaaacttcagacgggcctggacatgcgctggcttgagcaggggtaCCTtacgtgcgctgcaggattttaatccatgacggcgtagtgtgttactaatggttttctttgagactgtggtcccaactctcttcaggtcattgaccaggtcctgccatgtagttctgagCTGATCGCTCACCTTcctgagttcaaacaggtgagttcaaacaggtgcagtttttacaggtaatgagtggagaacaggagggcttaaagaaaaactaacaggtctgtgagagctggaattcatACTGGTTGGTAGGAGCTCaagtacttatgtcatgcaataaaatgcaaattaattagttaaaaatcatacaatgtgattatctgaattt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU677235 True 4195 lncRNA 0.40 4 28168349 28173047

Neighbor

gene id symbol gene type direction distance location
LOC110527600 LOC106575132 coding downstream 134045 27890406 ~ 28034304 (-)
ankrd10a ankrd10 coding downstream 314830 27802077 ~ 27853519 (-)
LOC110527596 cars2 coding downstream 372625 27785943 ~ 27795724 (-)
LOC110527597 rab20 coding downstream 383134 27781937 ~ 27785215 (-)
irs2a irs2 coding downstream 402414 27741604 ~ 27765935 (-)
LOC110527106 LOC106575135 coding upstream 2986 28176033 ~ 28177839 (-)
LOC110527603 LOC106575136 coding upstream 126660 28299707 ~ 28306319 (-)
LOC110527604 LOC100196534 coding upstream 408141 28581188 ~ 28615643 (-)
atp5mc3b atp5g3 coding upstream 444081 28617128 ~ 28619938 (-)
lnpk lnpb coding upstream 454342 28627389 ~ 28647053 (-)
G594138 NA non-coding downstream 44617 28121003 ~ 28123732 (-)
G594026 NA non-coding downstream 213793 27954331 ~ 27954556 (-)
G594018 NA non-coding downstream 222146 27945751 ~ 27946203 (-)
G594016 LOC106601697 non-coding downstream 224632 27943458 ~ 27943717 (-)
G593998 NA non-coding downstream 255450 27912685 ~ 27912899 (-)
G594207 NA non-coding upstream 93694 28266741 ~ 28290556 (-)
G594251 LOC105007064 non-coding upstream 182358 28355405 ~ 28356279 (-)
G594243 NA non-coding upstream 194114 28367161 ~ 28370155 (-)
G594394 NA non-coding upstream 365903 28538950 ~ 28539207 (-)
G594400 NA non-coding upstream 373693 28546740 ~ 28546940 (-)
G592298 NA other downstream 684569 27482957 ~ 27483780 (-)
G591808 NA other downstream 1001881 27166175 ~ 27166468 (-)
LOC110527590 LOC106575121 other downstream 1582842 26575613 ~ 26585525 (-)
G590443 NA other downstream 2010044 26157993 ~ 26158305 (-)
G589705 NA other downstream 2622931 25544735 ~ 25545418 (-)
G594636 LOC106593246 other upstream 851360 29024407 ~ 29026049 (-)
G594762 NA other upstream 1243808 29416855 ~ 29495130 (-)
G594900 NA other upstream 1395154 29568201 ~ 29593462 (-)
G594905 NA other upstream 1416946 29589993 ~ 29625899 (-)
G594906 NA other upstream 1426584 29599631 ~ 29612736 (-)

Expression


Co-expression Network