Gene
RNA
| Item | Value |
|---|---|
| gene id | G594251 |
| gene name | LOC105007064 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 28355405 ~ 28356279 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| nck-associated protein 1-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU677378 | True | 249 | lncRNA | 0.56 | 2 | 28355405 | 28356279 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527603 | LOC106575136 | coding | downstream | 49086 | 28299707 ~ 28306319 (-) |
| LOC110527106 | LOC106575135 | coding | downstream | 177566 | 28176033 ~ 28177839 (-) |
| LOC110527600 | LOC106575132 | coding | downstream | 321101 | 27890406 ~ 28034304 (-) |
| ankrd10a | ankrd10 | coding | downstream | 501886 | 27802077 ~ 27853519 (-) |
| LOC110527596 | cars2 | coding | downstream | 559681 | 27785943 ~ 27795724 (-) |
| LOC110527604 | LOC100196534 | coding | upstream | 224909 | 28581188 ~ 28615643 (-) |
| atp5mc3b | atp5g3 | coding | upstream | 260849 | 28617128 ~ 28619938 (-) |
| lnpk | lnpb | coding | upstream | 271110 | 28627389 ~ 28647053 (-) |
| LOC110527610 | LOC106575067 | coding | upstream | 340801 | 28697080 ~ 28724256 (-) |
| LOC110527612 | zc3hf | coding | upstream | 433699 | 28789978 ~ 28811952 (-) |
| G594207 | NA | non-coding | downstream | 64849 | 28266741 ~ 28290556 (-) |
| G594126 | NA | non-coding | downstream | 182358 | 28168349 ~ 28173047 (-) |
| G594138 | NA | non-coding | downstream | 231673 | 28121003 ~ 28123732 (-) |
| G594026 | NA | non-coding | downstream | 400849 | 27954331 ~ 27954556 (-) |
| G594018 | NA | non-coding | downstream | 409202 | 27945751 ~ 27946203 (-) |
| G594243 | NA | non-coding | upstream | 10882 | 28367161 ~ 28370155 (-) |
| G594394 | NA | non-coding | upstream | 182671 | 28538950 ~ 28539207 (-) |
| G594400 | NA | non-coding | upstream | 190461 | 28546740 ~ 28546940 (-) |
| G594375 | NA | non-coding | upstream | 197513 | 28553792 ~ 28555033 (-) |
| G594376 | NA | non-coding | upstream | 199615 | 28555894 ~ 28556909 (-) |
| G592298 | NA | other | downstream | 871625 | 27482957 ~ 27483780 (-) |
| G591808 | NA | other | downstream | 1188937 | 27166175 ~ 27166468 (-) |
| LOC110527590 | LOC106575121 | other | downstream | 1769898 | 26575613 ~ 26585525 (-) |
| G590443 | NA | other | downstream | 2197100 | 26157993 ~ 26158305 (-) |
| G589705 | NA | other | downstream | 2809987 | 25544735 ~ 25545418 (-) |
| G594636 | LOC106593246 | other | upstream | 668128 | 29024407 ~ 29026049 (-) |
| G594762 | NA | other | upstream | 1060576 | 29416855 ~ 29495130 (-) |
| G594900 | NA | other | upstream | 1211922 | 29568201 ~ 29593462 (-) |
| G594905 | NA | other | upstream | 1233714 | 29589993 ~ 29625899 (-) |
| G594906 | NA | other | upstream | 1243352 | 29599631 ~ 29612736 (-) |
