G594376


Basic Information

Item Value
gene id G594376
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 28555894 ~ 28556909 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU677511
tgtgttagaacaCCATTTTgccattttgtatatagttatttgtttcaaaatgtacaCCACCAATTTGGCCaattgggtacatttgggctacttgtgtgggacacctgggtgacttcatgataaatgtcatgtagcacactcattttggaagttatcattctgaaacttatcgttctgtactgttgccctcttatatttttcactgaaattgtccccatcatcctatctgaatatgttttttttcattgtattatctaaaccagatctattgtgttatattctcctacattcaattcacatttacacaaacttcagagtgttttctttcaaatggtaccaagaatatgcatatccttgcttctgggccagagctacaggcagttagatttgggtatgtcttcaggtggaaattgaaaaaaagtaGTGGGGTACCTCTAagagggacacaatcatgaaataatAAGACACACCTGAGACCAATAAAAGTCTCTAGGGGGGTCTCTGCCGCCCTCTAGTGCCAGGAGGAACCATGACGGTGTGTGCTGAAATCGCCTTAGGGACATGAGAGATACTATACAATGTTGTACTGCTGTGTGGCCTTTACATGTTGTATTTTTTCTCTGCGGGAGACTACATCTCTGTGCTGGAGATTCTAAAGATTTGTAACCAAGCATTCATTACATGACCAATTAGTGAAGGTATGGTGAGTGTTTCCTTCTTGTGGTGAAGAGCTGATGACATTTTCCCCTATATTCTGGTCGAGCAGCCACCGCCGAGCCCTAACCGGGAGACTGACCTTCGACAAGGTCAGCATCTGTAGGGTTTATGAGCGTCATTATGGAGAAGTACCACCTGTGAGACCCTGGTTGTCGAAACACAAGCAAATGCTCTGAAAGTCAAAGTGTGGGGAGGTGTCATTAATATTGGTATTGAAAGATGAGACTATCATGTGGGAATTGACGGTCCTGTTCTGGGTTGCTGTGGGAGGTGACGGGGCTTTAGCAGCTTGCATTGGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU677511 True 1016 lncRNA 0.42 1 28555894 28556909

Neighbor

gene id symbol gene type direction distance location
LOC110527603 LOC106575136 coding downstream 249575 28299707 ~ 28306319 (-)
LOC110527106 LOC106575135 coding downstream 378055 28176033 ~ 28177839 (-)
LOC110527600 LOC106575132 coding downstream 521590 27890406 ~ 28034304 (-)
ankrd10a ankrd10 coding downstream 702375 27802077 ~ 27853519 (-)
LOC110527596 cars2 coding downstream 760170 27785943 ~ 27795724 (-)
LOC110527604 LOC100196534 coding upstream 24279 28581188 ~ 28615643 (-)
atp5mc3b atp5g3 coding upstream 60219 28617128 ~ 28619938 (-)
lnpk lnpb coding upstream 70480 28627389 ~ 28647053 (-)
LOC110527610 LOC106575067 coding upstream 140171 28697080 ~ 28724256 (-)
LOC110527612 zc3hf coding upstream 233069 28789978 ~ 28811952 (-)
G594375 NA non-coding downstream 861 28553792 ~ 28555033 (-)
G594400 NA non-coding downstream 8954 28546740 ~ 28546940 (-)
G594394 NA non-coding downstream 16687 28538950 ~ 28539207 (-)
G594243 NA non-coding downstream 185739 28367161 ~ 28370155 (-)
G594251 LOC105007064 non-coding downstream 199615 28355405 ~ 28356279 (-)
G594377 NA non-coding upstream 321 28557230 ~ 28558335 (-)
G594423 NA non-coding upstream 100175 28657084 ~ 28657386 (-)
G594424 NA non-coding upstream 101351 28658260 ~ 28658569 (-)
G594429 NA non-coding upstream 109031 28665940 ~ 28666289 (-)
G594438 NA non-coding upstream 129261 28686170 ~ 28686779 (-)
G592298 NA other downstream 1072114 27482957 ~ 27483780 (-)
G591808 NA other downstream 1389426 27166175 ~ 27166468 (-)
LOC110527590 LOC106575121 other downstream 1970387 26575613 ~ 26585525 (-)
G590443 NA other downstream 2397589 26157993 ~ 26158305 (-)
G589705 NA other downstream 3010476 25544735 ~ 25545418 (-)
G594636 LOC106593246 other upstream 467498 29024407 ~ 29026049 (-)
G594762 NA other upstream 859946 29416855 ~ 29495130 (-)
G594900 NA other upstream 1011292 29568201 ~ 29593462 (-)
G594905 NA other upstream 1033084 29589993 ~ 29625899 (-)
G594906 NA other upstream 1042722 29599631 ~ 29612736 (-)

Expression


Co-expression Network