Gene
RNA
| Item | Value |
|---|---|
| gene id | G593005 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 28566830 ~ 28567405 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106612368 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU675981 | True | 576 | lncRNA | 0.42 | 1 | 28566830 | 28567405 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527602 | LOC105007064 | coding | upstream | 198800 | 28306267 ~ 28368030 (+) |
| LOC118965275 | LOC106575153 | coding | upstream | 308388 | 28221625 ~ 28258442 (+) |
| LOC100653476 | LOC106575134 | coding | upstream | 398629 | 28145536 ~ 28168201 (+) |
| plekha3 | LOC106575131 | coding | upstream | 692309 | 27854006 ~ 27874521 (+) |
| LOC110527593 | LOC106575124 | coding | upstream | 1012075 | 27505909 ~ 27555139 (+) |
| mtx2 | mtx2 | coding | downstream | 99011 | 28666416 ~ 28686793 (+) |
| LOC110527611 | rbm45 | coding | downstream | 187071 | 28754476 ~ 28780185 (+) |
| LOC110527622 | LOC106564406 | coding | downstream | 345235 | 28912640 ~ 28921397 (+) |
| LOC118965279 | LOC106595049 | coding | downstream | 408078 | 28975483 ~ 28977613 (+) |
| LOC118965280 | NA | coding | downstream | 419941 | 28987346 ~ 28992237 (+) |
| G592993 | NA | non-coding | upstream | 7808 | 28558685 ~ 28559022 (+) |
| G592990 | NA | non-coding | upstream | 11621 | 28554730 ~ 28555209 (+) |
| G592699 | NA | non-coding | upstream | 393875 | 28169546 ~ 28172955 (+) |
| G592684 | NA | non-coding | upstream | 428468 | 28022903 ~ 28138362 (+) |
| G592746 | NA | non-coding | upstream | 443148 | 28120990 ~ 28123682 (+) |
| G593006 | NA | non-coding | downstream | 693 | 28568098 ~ 28578328 (+) |
| G593007 | NA | non-coding | downstream | 6533 | 28573938 ~ 28582766 (+) |
| G593012 | LOC100196534 | non-coding | downstream | 18893 | 28586298 ~ 28587444 (+) |
| G593028 | NA | non-coding | downstream | 43213 | 28610618 ~ 28618334 (+) |
| G593046 | NA | non-coding | downstream | 79851 | 28647256 ~ 28647456 (+) |
| G592445 | lig4 | other | upstream | 859536 | 27703583 ~ 27707294 (+) |
| G592134 | NA | other | upstream | 1083034 | 27483050 ~ 27483796 (+) |
| G590949 | LOC106575121 | other | upstream | 1988897 | 26577407 ~ 26577933 (+) |
| G590936 | gart | other | upstream | 2013288 | 26552554 ~ 26553542 (+) |
| G593144 | NA | other | downstream | 267804 | 28835209 ~ 28841083 (+) |
| G593171 | NA | other | downstream | 324758 | 28892163 ~ 28892425 (+) |
| G593283 | NA | other | downstream | 492293 | 29059698 ~ 29064592 (+) |
| LOC110527619 | LOC106578599 | other | downstream | 762267 | 29329584 ~ 29503787 (+) |
| G593513 | LOC106610831 | other | downstream | 960622 | 29528027 ~ 29528910 (+) |
