Gene
RNA
| Item | Value |
|---|---|
| gene id | G593012 |
| gene name | LOC100196534 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 28586298 ~ 28587444 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU675997 | True | 820 | lncRNA | 0.45 | 3 | 28586298 | 28587444 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527602 | LOC105007064 | coding | upstream | 218268 | 28306267 ~ 28368030 (+) |
| LOC118965275 | LOC106575153 | coding | upstream | 327856 | 28221625 ~ 28258442 (+) |
| LOC100653476 | LOC106575134 | coding | upstream | 418097 | 28145536 ~ 28168201 (+) |
| plekha3 | LOC106575131 | coding | upstream | 711777 | 27854006 ~ 27874521 (+) |
| LOC110527593 | LOC106575124 | coding | upstream | 1031543 | 27505909 ~ 27555139 (+) |
| mtx2 | mtx2 | coding | downstream | 78972 | 28666416 ~ 28686793 (+) |
| LOC110527611 | rbm45 | coding | downstream | 167032 | 28754476 ~ 28780185 (+) |
| LOC110527622 | LOC106564406 | coding | downstream | 325196 | 28912640 ~ 28921397 (+) |
| LOC118965279 | LOC106595049 | coding | downstream | 388039 | 28975483 ~ 28977613 (+) |
| LOC118965280 | NA | coding | downstream | 399902 | 28987346 ~ 28992237 (+) |
| G593007 | NA | non-coding | upstream | 3532 | 28573938 ~ 28582766 (+) |
| G593006 | NA | non-coding | upstream | 7970 | 28568098 ~ 28578328 (+) |
| G593005 | NA | non-coding | upstream | 18893 | 28566830 ~ 28567405 (+) |
| G592993 | NA | non-coding | upstream | 27276 | 28558685 ~ 28559022 (+) |
| G592990 | NA | non-coding | upstream | 31089 | 28554730 ~ 28555209 (+) |
| G593028 | NA | non-coding | downstream | 23174 | 28610618 ~ 28618334 (+) |
| G593046 | NA | non-coding | downstream | 59812 | 28647256 ~ 28647456 (+) |
| G593051 | NA | non-coding | downstream | 66779 | 28654223 ~ 28654854 (+) |
| G593059 | NA | non-coding | downstream | 100766 | 28688210 ~ 28688881 (+) |
| G593093 | NA | non-coding | downstream | 141963 | 28729407 ~ 28729613 (+) |
| G592445 | lig4 | other | upstream | 879004 | 27703583 ~ 27707294 (+) |
| G592134 | NA | other | upstream | 1102502 | 27483050 ~ 27483796 (+) |
| G590949 | LOC106575121 | other | upstream | 2008365 | 26577407 ~ 26577933 (+) |
| G590936 | gart | other | upstream | 2032756 | 26552554 ~ 26553542 (+) |
| G593144 | NA | other | downstream | 247765 | 28835209 ~ 28841083 (+) |
| G593171 | NA | other | downstream | 304719 | 28892163 ~ 28892425 (+) |
| G593283 | NA | other | downstream | 472254 | 29059698 ~ 29064592 (+) |
| LOC110527619 | LOC106578599 | other | downstream | 742228 | 29329584 ~ 29503787 (+) |
| G593513 | LOC106610831 | other | downstream | 940583 | 29528027 ~ 29528910 (+) |
