G593046



Basic Information


Item Value
gene id G593046
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 28647256 ~ 28647456 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU676039
cccccctaccactctgcctgaccctgcttgctgacctgtacctttgcccacctctggattaccaacctctgctctaccctgagcctgcctgccacccgGTACCGTTGCCCGACCTCTGGTTTTCTGACcattgtctgccttgacctgttgattgcctgcccctgttggaatattaaacaCTTGTTCATTCGAtgcggtctg

Function


NR:

description
PREDICTED: uncharacterized protein LOC106589361 isoform X2

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU676039 True 201 lncRNA 0.56 1 28647256 28647456

Neighbor


gene id symbol gene type direction distance location
LOC110527602 LOC105007064 coding upstream 279226 28306267 ~ 28368030 (+)
LOC118965275 LOC106575153 coding upstream 388814 28221625 ~ 28258442 (+)
LOC100653476 LOC106575134 coding upstream 479055 28145536 ~ 28168201 (+)
plekha3 LOC106575131 coding upstream 772735 27854006 ~ 27874521 (+)
LOC110527593 LOC106575124 coding upstream 1092501 27505909 ~ 27555139 (+)
mtx2 mtx2 coding downstream 18960 28666416 ~ 28686793 (+)
LOC110527611 rbm45 coding downstream 107020 28754476 ~ 28780185 (+)
LOC110527622 LOC106564406 coding downstream 265184 28912640 ~ 28921397 (+)
LOC118965279 LOC106595049 coding downstream 328027 28975483 ~ 28977613 (+)
LOC118965280 NA coding downstream 339890 28987346 ~ 28992237 (+)
G593028 NA non-coding upstream 28922 28610618 ~ 28618334 (+)
G593012 LOC100196534 non-coding upstream 59812 28586298 ~ 28587444 (+)
G593007 NA non-coding upstream 64490 28573938 ~ 28582766 (+)
G593006 NA non-coding upstream 68928 28568098 ~ 28578328 (+)
G593005 NA non-coding upstream 79851 28566830 ~ 28567405 (+)
G593051 NA non-coding downstream 6767 28654223 ~ 28654854 (+)
G593059 NA non-coding downstream 40754 28688210 ~ 28688881 (+)
G593093 NA non-coding downstream 81951 28729407 ~ 28729613 (+)
G593111 NA non-coding downstream 97165 28744621 ~ 28744909 (+)
G592445 lig4 other upstream 939962 27703583 ~ 27707294 (+)
G592134 NA other upstream 1163460 27483050 ~ 27483796 (+)
G590949 LOC106575121 other upstream 2069323 26577407 ~ 26577933 (+)
G590936 gart other upstream 2093714 26552554 ~ 26553542 (+)
G593144 NA other downstream 187753 28835209 ~ 28841083 (+)
G593171 NA other downstream 244707 28892163 ~ 28892425 (+)
G593283 NA other downstream 412242 29059698 ~ 29064592 (+)
LOC110527619 LOC106578599 other downstream 682216 29329584 ~ 29503787 (+)
G593513 LOC106610831 other downstream 880571 29528027 ~ 29528910 (+)

Expression



Co-expression Network