G594356



Basic Information


Item Value
gene id G594356
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 28689713 ~ 28690610 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU677491
atttgagattcttcaaatagcctgccttgatgacagctttgcacactcttggcattgtctcggcattctctcacccagctttatgaggtagtcaccttccTAAAAGTTAATGtgcggaatttctttccttcttaatacctttgagccaatcagttgtgttgtaacaaagtagggggatatacagaagatagccctatttagttaaataccaagtccacattatggcaagaacagctcaaataagcaaagagaaacgacagtccatcattactttaagatatgatagtcagtcaatacggaacatttcaagaacttcgaAAGTTTCAAACCAGATTAACATggtctgtactttgtcatgtacagtatttgtatgttttttgtggacctcaggaagagtatcaactgcatgtgcagtagctaatggggatcctaataaattcAACTTAACCCTAACATccatatgtgaaaatggcacgTTTCTAGGTTTTGTGGAAAAGATAGGAAGATAAGTTTTTCCAATGACATCGGTGTGCATCATGTGATTTAAACtaattatgagtaggcattgcATGCTTATTGGTTGATGCATTGTAAACACGTAGAAACGTGCTATTATCACATAcactatacagtggggagaacaagtatttgatacactgccgattttgccgattttcctacttacaaagcatgtagaggtctgtaatttttatcataggtacacttcaactgtgagagacggaatctaaaacaaaaatccagaaaatcacattgtatgatttttaagtaattaatttgcattttattgcatgacgtaagtatttgatacatcagaaaagcataacttaatatttggtacagaaacctatGTTAGCAATTACAGacatcatacatttcc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU677491 True 898 lncRNA 0.36 1 28689713 28690610

Neighbor


gene id symbol gene type direction distance location
lnpk lnpb coding downstream 42660 28627389 ~ 28647053 (-)
atp5mc3b atp5g3 coding downstream 69775 28617128 ~ 28619938 (-)
LOC110527604 LOC100196534 coding downstream 74070 28581188 ~ 28615643 (-)
LOC110527603 LOC106575136 coding downstream 383394 28299707 ~ 28306319 (-)
LOC110527106 LOC106575135 coding downstream 511874 28176033 ~ 28177839 (-)
LOC110527610 LOC106575067 coding upstream 6470 28697080 ~ 28724256 (-)
LOC110527612 zc3hf coding upstream 99368 28789978 ~ 28811952 (-)
LOC110528825 NA coding upstream 160629 28850876 ~ 28860855 (-)
LOC110528935 LOC106594387 coding upstream 254209 28944819 ~ 28954980 (-)
LOC110527617 NA coding upstream 360293 29050903 ~ 29058242 (-)
G594438 NA non-coding downstream 2934 28686170 ~ 28686779 (-)
G594429 NA non-coding downstream 23424 28665940 ~ 28666289 (-)
G594424 NA non-coding downstream 31144 28658260 ~ 28658569 (-)
G594423 NA non-coding downstream 32327 28657084 ~ 28657386 (-)
G594377 NA non-coding downstream 131378 28557230 ~ 28558335 (-)
G594357 NA non-coding upstream 2311 28692921 ~ 28709446 (-)
G594450 NA non-coding upstream 78874 28769484 ~ 28769630 (-)
G594511 NA non-coding upstream 140365 28830975 ~ 28831300 (-)
G594512 NA non-coding upstream 141085 28831695 ~ 28832037 (-)
G594513 NA non-coding upstream 142240 28832850 ~ 28833086 (-)
G592298 NA other downstream 1205933 27482957 ~ 27483780 (-)
G591808 NA other downstream 1523245 27166175 ~ 27166468 (-)
LOC110527590 LOC106575121 other downstream 2104206 26575613 ~ 26585525 (-)
G590443 NA other downstream 2531408 26157993 ~ 26158305 (-)
G589705 NA other downstream 3144295 25544735 ~ 25545418 (-)
G594636 LOC106593246 other upstream 333797 29024407 ~ 29026049 (-)
G594762 NA other upstream 726245 29416855 ~ 29495130 (-)
G594900 NA other upstream 877591 29568201 ~ 29593462 (-)
G594905 NA other upstream 899383 29589993 ~ 29625899 (-)
G594906 NA other upstream 909021 29599631 ~ 29612736 (-)

Expression



Co-expression Network