Gene
RNA
| Item | Value |
|---|---|
| gene id | G593142 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 28833852 ~ 28834238 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU676136 | True | 387 | lncRNA | 0.39 | 1 | 28833852 | 28834238 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527611 | rbm45 | coding | upstream | 53667 | 28754476 ~ 28780185 (+) |
| mtx2 | mtx2 | coding | upstream | 147059 | 28666416 ~ 28686793 (+) |
| LOC110527602 | LOC105007064 | coding | upstream | 465822 | 28306267 ~ 28368030 (+) |
| LOC118965275 | LOC106575153 | coding | upstream | 575410 | 28221625 ~ 28258442 (+) |
| LOC100653476 | LOC106575134 | coding | upstream | 665651 | 28145536 ~ 28168201 (+) |
| LOC110527622 | LOC106564406 | coding | downstream | 78402 | 28912640 ~ 28921397 (+) |
| LOC118965279 | LOC106595049 | coding | downstream | 141245 | 28975483 ~ 28977613 (+) |
| LOC118965280 | NA | coding | downstream | 153108 | 28987346 ~ 28992237 (+) |
| LOC110527630 | NA | coding | downstream | 176740 | 29010978 ~ 29013251 (+) |
| LOC110527620 | NA | coding | downstream | 192093 | 29026331 ~ 29035347 (+) |
| G593139 | NA | non-coding | upstream | 6368 | 28827240 ~ 28827484 (+) |
| G593135 | NA | non-coding | upstream | 10629 | 28822939 ~ 28823223 (+) |
| G593111 | NA | non-coding | upstream | 88943 | 28744621 ~ 28744909 (+) |
| G593093 | NA | non-coding | upstream | 104239 | 28729407 ~ 28729613 (+) |
| G593145 | NA | non-coding | downstream | 4886 | 28839124 ~ 28844604 (+) |
| G593147 | NA | non-coding | downstream | 10781 | 28845019 ~ 28845233 (+) |
| G593150 | NA | non-coding | downstream | 15805 | 28850043 ~ 28850280 (+) |
| G593102 | NA | non-coding | downstream | 16643 | 28850881 ~ 28851394 (+) |
| G593100 | NA | non-coding | downstream | 26162 | 28860400 ~ 28860756 (+) |
| plekha3 | LOC106575131 | other | upstream | 959431 | 27854006 ~ 27874521 (+) |
| G592445 | lig4 | other | upstream | 1126558 | 27703583 ~ 27707294 (+) |
| G592134 | NA | other | upstream | 1350056 | 27483050 ~ 27483796 (+) |
| G590949 | LOC106575121 | other | upstream | 2255919 | 26577407 ~ 26577933 (+) |
| G590936 | gart | other | upstream | 2280310 | 26552554 ~ 26553542 (+) |
| G593144 | NA | other | downstream | 971 | 28835209 ~ 28841083 (+) |
| G593171 | NA | other | downstream | 57925 | 28892163 ~ 28892425 (+) |
| G593283 | NA | other | downstream | 225460 | 29059698 ~ 29064592 (+) |
| LOC110527619 | LOC106578599 | other | downstream | 495434 | 29329584 ~ 29503787 (+) |
| G593513 | LOC106610831 | other | downstream | 693789 | 29528027 ~ 29528910 (+) |
