G593150


Basic Information

Item Value
gene id G593150
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 28850043 ~ 28850280 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676145
ATACAAAACGTAAGAAATTCTCAGGTACTCACGACAACCATTCCATTTGCTTTTTCAAGGACTCTCCATAGCTACGAAGCAGCTCTCCAAACATACTCCCAGCAGAacccaaaaaatatatagatcTCTGTTACCACCCAAACTTCAGATTAAGACTCAATCACACAACTCTCATATCGCAGTCACACAATGCTATTCCCAAACATAGCTATTCAAATTAGTTGTTTTTCAACAATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676145 True 238 lncRNA 0.37 1 28850043 28850280

Neighbor

gene id symbol gene type direction distance location
LOC110527611 rbm45 coding upstream 69858 28754476 ~ 28780185 (+)
mtx2 mtx2 coding upstream 163250 28666416 ~ 28686793 (+)
LOC110527602 LOC105007064 coding upstream 482013 28306267 ~ 28368030 (+)
LOC118965275 LOC106575153 coding upstream 591601 28221625 ~ 28258442 (+)
LOC100653476 LOC106575134 coding upstream 681842 28145536 ~ 28168201 (+)
LOC110527622 LOC106564406 coding downstream 62360 28912640 ~ 28921397 (+)
LOC118965279 LOC106595049 coding downstream 125203 28975483 ~ 28977613 (+)
LOC118965280 NA coding downstream 137066 28987346 ~ 28992237 (+)
LOC110527630 NA coding downstream 160698 29010978 ~ 29013251 (+)
LOC110527620 NA coding downstream 176051 29026331 ~ 29035347 (+)
G593147 NA non-coding upstream 4810 28845019 ~ 28845233 (+)
G593145 NA non-coding upstream 5439 28839124 ~ 28844604 (+)
G593142 NA non-coding upstream 15805 28833852 ~ 28834238 (+)
G593139 NA non-coding upstream 22559 28827240 ~ 28827484 (+)
G593135 NA non-coding upstream 26820 28822939 ~ 28823223 (+)
G593102 NA non-coding downstream 601 28850881 ~ 28851394 (+)
G593100 NA non-coding downstream 10120 28860400 ~ 28860756 (+)
G593155 NA non-coding downstream 12085 28862365 ~ 28862634 (+)
G593158 NA non-coding downstream 21629 28871909 ~ 28872153 (+)
G593160 NA non-coding downstream 24416 28874696 ~ 28875037 (+)
G593144 NA other upstream 8960 28835209 ~ 28841083 (+)
plekha3 LOC106575131 other upstream 975622 27854006 ~ 27874521 (+)
G592445 lig4 other upstream 1142749 27703583 ~ 27707294 (+)
G592134 NA other upstream 1366247 27483050 ~ 27483796 (+)
G590949 LOC106575121 other upstream 2272110 26577407 ~ 26577933 (+)
G593171 NA other downstream 41883 28892163 ~ 28892425 (+)
G593283 NA other downstream 209418 29059698 ~ 29064592 (+)
LOC110527619 LOC106578599 other downstream 479392 29329584 ~ 29503787 (+)
G593513 LOC106610831 other downstream 677747 29528027 ~ 29528910 (+)
G593774 LOC106593940 other downstream 1181679 30031959 ~ 30032621 (+)

Expression


Co-expression Network