Gene
RNA
| Item | Value |
|---|---|
| gene id | G593100 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 28860400 ~ 28860756 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU676094 | True | 357 | lncRNA | 0.41 | 1 | 28860400 | 28860756 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527611 | rbm45 | coding | upstream | 80215 | 28754476 ~ 28780185 (+) |
| mtx2 | mtx2 | coding | upstream | 173607 | 28666416 ~ 28686793 (+) |
| LOC110527602 | LOC105007064 | coding | upstream | 492370 | 28306267 ~ 28368030 (+) |
| LOC118965275 | LOC106575153 | coding | upstream | 601958 | 28221625 ~ 28258442 (+) |
| LOC100653476 | LOC106575134 | coding | upstream | 692199 | 28145536 ~ 28168201 (+) |
| LOC110527622 | LOC106564406 | coding | downstream | 51884 | 28912640 ~ 28921397 (+) |
| LOC118965279 | LOC106595049 | coding | downstream | 114727 | 28975483 ~ 28977613 (+) |
| LOC118965280 | NA | coding | downstream | 126590 | 28987346 ~ 28992237 (+) |
| LOC110527630 | NA | coding | downstream | 150222 | 29010978 ~ 29013251 (+) |
| LOC110527620 | NA | coding | downstream | 165575 | 29026331 ~ 29035347 (+) |
| G593102 | NA | non-coding | upstream | 9006 | 28850881 ~ 28851394 (+) |
| G593150 | NA | non-coding | upstream | 10120 | 28850043 ~ 28850280 (+) |
| G593147 | NA | non-coding | upstream | 15167 | 28845019 ~ 28845233 (+) |
| G593145 | NA | non-coding | upstream | 15796 | 28839124 ~ 28844604 (+) |
| G593142 | NA | non-coding | upstream | 26162 | 28833852 ~ 28834238 (+) |
| G593155 | NA | non-coding | downstream | 1609 | 28862365 ~ 28862634 (+) |
| G593158 | NA | non-coding | downstream | 11153 | 28871909 ~ 28872153 (+) |
| G593160 | NA | non-coding | downstream | 13940 | 28874696 ~ 28875037 (+) |
| G593163 | NA | non-coding | downstream | 15887 | 28876643 ~ 28877049 (+) |
| G593170 | LOC107661334 | non-coding | downstream | 31066 | 28891822 ~ 28892071 (+) |
| G593144 | NA | other | upstream | 19317 | 28835209 ~ 28841083 (+) |
| plekha3 | LOC106575131 | other | upstream | 985979 | 27854006 ~ 27874521 (+) |
| G592445 | lig4 | other | upstream | 1153106 | 27703583 ~ 27707294 (+) |
| G592134 | NA | other | upstream | 1376604 | 27483050 ~ 27483796 (+) |
| G590949 | LOC106575121 | other | upstream | 2282467 | 26577407 ~ 26577933 (+) |
| G593171 | NA | other | downstream | 31407 | 28892163 ~ 28892425 (+) |
| G593283 | NA | other | downstream | 198942 | 29059698 ~ 29064592 (+) |
| LOC110527619 | LOC106578599 | other | downstream | 468916 | 29329584 ~ 29503787 (+) |
| G593513 | LOC106610831 | other | downstream | 667271 | 29528027 ~ 29528910 (+) |
| G593774 | LOC106593940 | other | downstream | 1171203 | 30031959 ~ 30032621 (+) |
